BLASTX nr result

ID: Atractylodes21_contig00035629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035629
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC12445.1| DNA N-glycosylase/DNA-(apurinic or apyrimidinic s...   127   1e-27
ref|XP_002528585.1| Protein ROS1, putative [Ricinus communis] gi...   126   2e-27
gb|AEC12446.1| repressor of gene silencing 1 [Gossypium hirsutum]     125   3e-27
dbj|BAF52857.1| repressor of silencing 2b [Nicotiana tabacum]         123   1e-26
dbj|BAF52856.1| repressor of silencing 2a [Nicotiana tabacum]         123   1e-26

>gb|AEC12445.1| DNA N-glycosylase/DNA-(apurinic or apyrimidinic site) lyase
            [Gossypium hirsutum]
          Length = 2055

 Score =  127 bits (318), Expect = 1e-27
 Identities = 64/89 (71%), Positives = 76/89 (85%), Gaps = 2/89 (2%)
 Frame = -1

Query: 263  DSFIARMHLVQGDRRFSQWKGSVLDSVIGVFLTQNVSDHLSSSAFMSLAARYPLKSKSSS 84
            DSFIARMHLVQGDRRFS+WKGSV+DSVIGVFLTQNVSDHLSSSAFMSLAA++PLKS    
Sbjct: 1062 DSFIARMHLVQGDRRFSKWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLAAKFPLKSSCKG 1121

Query: 83   EPLHEENSILSVKEP--CQVDQEETIRWH 3
            +   E  +IL ++EP  C+++ EETI+WH
Sbjct: 1122 DCNAERTTIL-IEEPEVCELNSEETIKWH 1149


>ref|XP_002528585.1| Protein ROS1, putative [Ricinus communis] gi|223531981|gb|EEF33793.1|
            Protein ROS1, putative [Ricinus communis]
          Length = 1634

 Score =  126 bits (316), Expect = 2e-27
 Identities = 62/90 (68%), Positives = 76/90 (84%), Gaps = 2/90 (2%)
 Frame = -1

Query: 266  ADSFIARMHLVQGDRRFSQWKGSVLDSVIGVFLTQNVSDHLSSSAFMSLAARYPLKSKSS 87
            A+SFIARMHLVQGDRRFSQWKGSV+DSV+GVFLTQNVSDHLSSSAFMSLAA +PLKS+S 
Sbjct: 825  ANSFIARMHLVQGDRRFSQWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAAHFPLKSQSH 884

Query: 86   SEPLHEENSILSVKEP--CQVDQEETIRWH 3
            +E  +EE +   + +P  C  D E+T++W+
Sbjct: 885  NEQCYEERTGSVIDKPIVCMPDLEDTLKWN 914


>gb|AEC12446.1| repressor of gene silencing 1 [Gossypium hirsutum]
          Length = 1758

 Score =  125 bits (315), Expect = 3e-27
 Identities = 64/88 (72%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
 Frame = -1

Query: 266 ADSFIARMHLVQGDRRFSQWKGSVLDSVIGVFLTQNVSDHLSSSAFMSLAARYPLKSKSS 87
           ADSFIARMHLVQGDRRFS WKGSVLDSVIGVFLTQNVSDHLSSSAFMSLAAR+P+KSKS 
Sbjct: 726 ADSFIARMHLVQGDRRFSPWKGSVLDSVIGVFLTQNVSDHLSSSAFMSLAARFPIKSKSK 785

Query: 86  SEPLHEE-NSILSVKEPCQVDQEETIRW 6
            +  H+E  S+++ +E   ++ EE+I+W
Sbjct: 786 DKLYHQEGTSLVNGEEFYVLEPEESIKW 813


>dbj|BAF52857.1| repressor of silencing 2b [Nicotiana tabacum]
          Length = 1673

 Score =  123 bits (309), Expect = 1e-26
 Identities = 63/90 (70%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
 Frame = -1

Query: 266  ADSFIARMHLVQGDRRFSQWKGSVLDSVIGVFLTQNVSDHLSSSAFMSLAARYPLKSKSS 87
            ADSFIARM LVQGDRRFS WKGSV+DSV+GVFLTQNVSDHLSSSAFMSLAA +PLK+KSS
Sbjct: 879  ADSFIARMRLVQGDRRFSPWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAAHFPLKTKSS 938

Query: 86   SEPLHEENSILSVKEP--CQVDQEETIRWH 3
            ++  HE  + + ++EP  C  D   +IRWH
Sbjct: 939  TQK-HEGRTAIIIEEPEACATDPIVSIRWH 967


>dbj|BAF52856.1| repressor of silencing 2a [Nicotiana tabacum]
          Length = 1673

 Score =  123 bits (309), Expect = 1e-26
 Identities = 63/90 (70%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
 Frame = -1

Query: 266  ADSFIARMHLVQGDRRFSQWKGSVLDSVIGVFLTQNVSDHLSSSAFMSLAARYPLKSKSS 87
            ADSFIARM LVQGDRRFS WKGSV+DSV+GVFLTQNVSDHLSSSAFMSLAA +PLK+KSS
Sbjct: 879  ADSFIARMRLVQGDRRFSPWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAAHFPLKTKSS 938

Query: 86   SEPLHEENSILSVKEP--CQVDQEETIRWH 3
            ++  HE  + + ++EP  C  D   +IRWH
Sbjct: 939  TQK-HEGRTAIIIEEPEACATDPIVSIRWH 967


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