BLASTX nr result

ID: Atractylodes21_contig00035614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035614
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21002.3| unnamed protein product [Vitis vinifera]              147   1e-33
ref|XP_002282448.1| PREDICTED: uncharacterized protein LOC100264...   147   1e-33
ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267...   134   1e-29
emb|CBI28156.3| unnamed protein product [Vitis vinifera]              125   7e-27
ref|XP_002524440.1| RNA binding protein, putative [Ricinus commu...   112   6e-23

>emb|CBI21002.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  147 bits (372), Expect = 1e-33
 Identities = 88/190 (46%), Positives = 115/190 (60%), Gaps = 7/190 (3%)
 Frame = +2

Query: 2   LQSWVAGDIMEVFDDNSWKTATVCKVLDGGHFSVRPHGLTHEINVHKSNIRTRQSWQDGQ 181
           ++SWV GD++EVF+D SWK A V KV    ++ VR  G  HE  VHKSNIR RQ+W D +
Sbjct: 69  MESWVTGDVVEVFNDGSWKCAMVLKVTCAVYYLVRLLGSCHEFEVHKSNIRVRQAWIDDK 128

Query: 182 WVPIVKFSGNYGDANVKQIVEPNCDTKLGLQIPVADAKI-CQEKDNCLVVYNDGGLQESL 358
           WV I + S  + D  V +++  NC  K+  Q+P AD K+  Q  D+    + D   Q+S 
Sbjct: 129 WVVIGQGSITFEDVRVNKLLTSNCHQKMSFQVPQADMKLKLQAGDDFFQKHAD--FQDSP 186

Query: 359 VVSSKTLKRASPFCSSHLEASPGNAKKFKAAEKEHRRRLIPDQS---LEKVDALACPP-- 523
           +VSSKTLKRASP+CSS LEA  GN +K +A E   R+R+I   S     KVDA+A P   
Sbjct: 187 MVSSKTLKRASPYCSSGLEAYSGNIQKMRAIENGGRQRVITGYSSPLRAKVDAVAYPRLN 246

Query: 524 -GGKKTQASF 550
            G K   ASF
Sbjct: 247 LGEKYMHASF 256


>ref|XP_002282448.1| PREDICTED: uncharacterized protein LOC100264564 [Vitis vinifera]
          Length = 440

 Score =  147 bits (372), Expect = 1e-33
 Identities = 88/190 (46%), Positives = 115/190 (60%), Gaps = 7/190 (3%)
 Frame = +2

Query: 2   LQSWVAGDIMEVFDDNSWKTATVCKVLDGGHFSVRPHGLTHEINVHKSNIRTRQSWQDGQ 181
           ++SWV GD++EVF+D SWK A V KV    ++ VR  G  HE  VHKSNIR RQ+W D +
Sbjct: 69  MESWVTGDVVEVFNDGSWKCAMVLKVTCAVYYLVRLLGSCHEFEVHKSNIRVRQAWIDDK 128

Query: 182 WVPIVKFSGNYGDANVKQIVEPNCDTKLGLQIPVADAKI-CQEKDNCLVVYNDGGLQESL 358
           WV I + S  + D  V +++  NC  K+  Q+P AD K+  Q  D+    + D   Q+S 
Sbjct: 129 WVVIGQGSITFEDVRVNKLLTSNCHQKMSFQVPQADMKLKLQAGDDFFQKHAD--FQDSP 186

Query: 359 VVSSKTLKRASPFCSSHLEASPGNAKKFKAAEKEHRRRLIPDQS---LEKVDALACPP-- 523
           +VSSKTLKRASP+CSS LEA  GN +K +A E   R+R+I   S     KVDA+A P   
Sbjct: 187 MVSSKTLKRASPYCSSGLEAYSGNIQKMRAIENGGRQRVITGYSSPLRAKVDAVAYPRLN 246

Query: 524 -GGKKTQASF 550
            G K   ASF
Sbjct: 247 LGEKYMHASF 256


>ref|XP_002285023.2| PREDICTED: uncharacterized protein LOC100267997 [Vitis vinifera]
          Length = 415

 Score =  134 bits (336), Expect = 1e-29
 Identities = 83/199 (41%), Positives = 110/199 (55%), Gaps = 8/199 (4%)
 Frame = +2

Query: 5   QSWVAGDIMEVFDDNSWKTATVCKVLDGGHFSVRPHGLTHEINVHKSNIRTRQSWQDGQW 184
           + W+ GDI+EVFD+ SWK ATV KVL   +F VR  G + E  V K ++R RQSWQD +W
Sbjct: 70  EGWIPGDIVEVFDNFSWKMATVSKVLGKKYFLVRHLGSSLEFKVRKYDLRVRQSWQDDKW 129

Query: 185 VPIVKFSGNYGDANVKQIVEPNCDTKLGLQIPVADAKI-CQEKDNCLVVYNDGGLQESLV 361
           + I K SG + D         N       Q+   D ++    KDNC  V N+    ES +
Sbjct: 130 IVIGKSSGTFEDRKPSGPPTHNYIQNSSFQVQEMDTRMKLSRKDNCFTVKNNADFPESRI 189

Query: 362 VSSKTLKRASPFCSSHLEASPGNAKKFKAAEKEHR--RRLIPDQSL--EKVDALACPP-- 523
            SS+TLKR SPF  S +EA  G+A+KF+  EKE R  R +  + SL  EKV+A+A P   
Sbjct: 190 ASSRTLKRGSPFGYSQVEAYAGSAQKFRLTEKEGRLHRAVAANASLLPEKVEAVASPREM 249

Query: 524 -GGKKTQASFYNTVNGFYE 577
            G     ASF +   G+ E
Sbjct: 250 LGENYMHASFNSRPTGYSE 268


>emb|CBI28156.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score =  125 bits (313), Expect = 7e-27
 Identities = 68/155 (43%), Positives = 89/155 (57%), Gaps = 1/155 (0%)
 Frame = +2

Query: 5   QSWVAGDIMEVFDDNSWKTATVCKVLDGGHFSVRPHGLTHEINVHKSNIRTRQSWQDGQW 184
           + W+ GDI+EVFD+ SWK ATV KVL   +F VR  G + E  V K ++R RQSWQD +W
Sbjct: 70  EGWIPGDIVEVFDNFSWKMATVSKVLGKKYFLVRHLGSSLEFKVRKYDLRVRQSWQDDKW 129

Query: 185 VPIVKFSGNYGDANVKQIVEPNCDTKLGLQIPVADAKI-CQEKDNCLVVYNDGGLQESLV 361
           + I K SG + D         N       Q+   D ++    KDNC  V N+    ES +
Sbjct: 130 IVIGKSSGTFEDRKPSGPPTHNYIQNSSFQVQEMDTRMKLSRKDNCFTVKNNADFPESRI 189

Query: 362 VSSKTLKRASPFCSSHLEASPGNAKKFKAAEKEHR 466
            SS+TLKR SPF  S +EA  G+A+KF+  EKE R
Sbjct: 190 ASSRTLKRGSPFGYSQVEAYAGSAQKFRLTEKEGR 224


>ref|XP_002524440.1| RNA binding protein, putative [Ricinus communis]
           gi|223536228|gb|EEF37880.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 383

 Score =  112 bits (279), Expect = 6e-23
 Identities = 78/198 (39%), Positives = 106/198 (53%), Gaps = 7/198 (3%)
 Frame = +2

Query: 5   QSWVAGDIMEVFDDNSWKTATVCKVLDGGHFSVRPHGLTHEINVHKSNIRTRQSWQDGQW 184
           ++W  GD++EVFDD SWK AT+ KVL   +F  R  G + E  V KS IRTRQSWQDG+W
Sbjct: 44  ENWAPGDVVEVFDDFSWKMATISKVLGKKYFLARIVGSSLEFKVSKSGIRTRQSWQDGKW 103

Query: 185 VPIVKFSGNYGDANVKQIVEPNCDTKLGLQIPVADAKICQEKDNCLVVYNDGGLQESLVV 364
           + I K SG+Y D    + V   C       + +   ++   K     + N   L+ S +V
Sbjct: 104 IVIGKGSGSYEDTKHDENVTLKCKQNSQNNVQMRSTRL---KVGSFRMRNKETLKGSNIV 160

Query: 365 SSKTLKRASPFCSSHLEASPGNAKKFKAAEKEHR--RRLIPDQS--LEKVDALACPP--- 523
           S +TLKR  P     +E   G A+KF+A EKE R  R L  +QS   ++ D +A P    
Sbjct: 161 SCRTLKR-GPCGYKQVETYDGAAQKFRAVEKEGRLHRVLAANQSSFAQQGDDVAFPKEMV 219

Query: 524 GGKKTQASFYNTVNGFYE 577
           G K   +SFY+   GF E
Sbjct: 220 GEKNMHSSFYSQ-TGFTE 236


Top