BLASTX nr result

ID: Atractylodes21_contig00035571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035571
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...   167   8e-40
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...   164   7e-39
emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group]                162   3e-38
ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group] g...   159   2e-37
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]     159   2e-37

>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score =  167 bits (423), Expect = 8e-40
 Identities = 79/105 (75%), Positives = 86/105 (81%)
 Frame = +3

Query: 3    WILVPRPSGVNLVRSMWLLKHKFHADGTLSRYKARLVANGSSQQLGIDCDETFSPVVKPT 182
            W LVPRPSG N+V   W+ KHKF +DGTL RYKAR V  G SQ+LGID DETFSPVVKP 
Sbjct: 1112 WDLVPRPSGANVVTGKWIFKHKFQSDGTLDRYKARWVLRGFSQRLGIDFDETFSPVVKPA 1171

Query: 183  TIRTVLSLAVSRKWPVHQLDVKNAFLNGELSETVYMHQPPGFVDP 317
            T+RTVLSLAVSR WP+HQLDVKNAFL+G L ETVY  QPPGFVDP
Sbjct: 1172 TVRTVLSLAVSRDWPIHQLDVKNAFLHGTLQETVYCIQPPGFVDP 1216


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1679

 Score =  164 bits (415), Expect = 7e-39
 Identities = 77/104 (74%), Positives = 86/104 (82%)
 Frame = +3

Query: 3    WILVPRPSGVNLVRSMWLLKHKFHADGTLSRYKARLVANGSSQQLGIDCDETFSPVVKPT 182
            W LVPRP+GVN+V   W+ KHKFHADG+L RYKAR V  G +Q+ G+D DETFSPVVKP 
Sbjct: 1204 WDLVPRPAGVNVVTGKWIFKHKFHADGSLDRYKARWVLRGFTQRPGVDFDETFSPVVKPA 1263

Query: 183  TIRTVLSLAVSRKWPVHQLDVKNAFLNGELSETVYMHQPPGFVD 314
            T+RTVLSLAVSR WPVHQLDVKNAFL+G L ETVY  QPPGFVD
Sbjct: 1264 TVRTVLSLAVSRDWPVHQLDVKNAFLHGTLQETVYCTQPPGFVD 1307


>emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group]
          Length = 811

 Score =  162 bits (409), Expect = 3e-38
 Identities = 76/104 (73%), Positives = 85/104 (81%)
 Frame = +3

Query: 3   WILVPRPSGVNLVRSMWLLKHKFHADGTLSRYKARLVANGSSQQLGIDCDETFSPVVKPT 182
           W LVPRP+ VN+V   W+ KHKFHADG+L RYKAR V  G +Q+ G+D DETFSPVVKP 
Sbjct: 336 WDLVPRPASVNVVAGKWIFKHKFHADGSLDRYKARWVLRGFTQRPGVDFDETFSPVVKPA 395

Query: 183 TIRTVLSLAVSRKWPVHQLDVKNAFLNGELSETVYMHQPPGFVD 314
           T+RTVLSLAVSR WPVHQLDVKNAFL+G L ETVY  QPPGFVD
Sbjct: 396 TVRTVLSLAVSRDWPVHQLDVKNAFLHGTLQETVYCTQPPGFVD 439


>ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group]
           gi|255676152|dbj|BAH93014.1| Os05g0235100, partial
           [Oryza sativa Japonica Group]
          Length = 841

 Score =  159 bits (402), Expect = 2e-37
 Identities = 74/105 (70%), Positives = 82/105 (78%)
 Frame = +3

Query: 3   WILVPRPSGVNLVRSMWLLKHKFHADGTLSRYKARLVANGSSQQLGIDCDETFSPVVKPT 182
           W LVPRP G N+V   W+ KHKFH+DGTL+R+KAR V  G SQQ GID DETFSPVVKP 
Sbjct: 356 WRLVPRPPGANVVTGKWIFKHKFHSDGTLARHKARWVVRGYSQQHGIDYDETFSPVVKPA 415

Query: 183 TIRTVLSLAVSRKWPVHQLDVKNAFLNGELSETVYMHQPPGFVDP 317
           TI  VLS+A SR WP+HQLDVKNAFL+G L ETVY  QP GFVDP
Sbjct: 416 TIHVVLSIAASRSWPIHQLDVKNAFLHGNLEETVYYQQPSGFVDP 460


>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1480

 Score =  159 bits (402), Expect = 2e-37
 Identities = 74/105 (70%), Positives = 82/105 (78%)
 Frame = +3

Query: 3    WILVPRPSGVNLVRSMWLLKHKFHADGTLSRYKARLVANGSSQQLGIDCDETFSPVVKPT 182
            W LVPRP G N+V   W+ KHKFH+DGTL+R+KAR V  G SQQ GID DETFSPVVKP 
Sbjct: 995  WRLVPRPPGANVVTGKWIFKHKFHSDGTLARHKARWVVRGYSQQHGIDYDETFSPVVKPA 1054

Query: 183  TIRTVLSLAVSRKWPVHQLDVKNAFLNGELSETVYMHQPPGFVDP 317
            TI  VLS+A SR WP+HQLDVKNAFL+G L ETVY  QP GFVDP
Sbjct: 1055 TIHVVLSIAASRSWPIHQLDVKNAFLHGNLEETVYYQQPSGFVDP 1099


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