BLASTX nr result

ID: Atractylodes21_contig00035523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035523
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   103   2e-20
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    89   3e-16
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    77   2e-15
ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...    85   5e-15
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    78   7e-13

>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/112 (47%), Positives = 70/112 (62%)
 Frame = -2

Query: 427  FRTTAEGSLCEQFLAVREEGTVADYKRRFVAMAAPLEGITEEMFVGQFINGLTPDLRAEV 248
            FR T EGSLCEQFLAVR++GTVA Y R F  +  PL+GI+EE+    F+NGL P++RAE 
Sbjct: 843  FRLTQEGSLCEQFLAVRQQGTVAAYWREFEILETPLKGISEEVMESTFMNGLLPEIRAEQ 902

Query: 247  RLLSPVGLNRAMELASMVEEKNKVVLRGKSVKAYTSTKKVFEGGSEEKWSAG 92
            RLL P GL   ME+A  VE++N  +   +      ST K+    +  +W  G
Sbjct: 903  RLLQPYGLGHLMEMAQRVEDRNLAMRAAREPNGPKST-KMLSTANRGEWKIG 953


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/84 (50%), Positives = 65/84 (77%)
 Frame = -2

Query: 427 FRTTAEGSLCEQFLAVREEGTVADYKRRFVAMAAPLEGITEEMFVGQFINGLTPDLRAEV 248
           FR    GSL EQ+L+  +  +V +Y+R+FV  AAPL+GI EE+ +G+FI+GL P+L++E+
Sbjct: 247 FRPLNVGSLHEQWLSTTQTASVWEYRRKFVETAAPLDGIPEEILMGKFIHGLNPELQSEI 306

Query: 247 RLLSPVGLNRAMELASMVEEKNKV 176
           R+L+P  L++AMELA  +EE+N+V
Sbjct: 307 RVLNPYNLDQAMELALKLEERNRV 330


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 76.6 bits (187), Expect(2) = 2e-15
 Identities = 43/119 (36%), Positives = 62/119 (52%)
 Frame = -2

Query: 427 FRTTAEGSLCEQFLAVREEGTVADYKRRFVAMAAPLEGITEEMFVGQFINGLTPDLRAEV 248
           FR    G+ C +FLA+++EG+V++Y ++F  ++APL  + EE+  G F NGL P +R EV
Sbjct: 141 FRCRDYGTACARFLAIKQEGSVSEYLQKFEELSAPLPEMAEEVLEGTFTNGLDPRIRKEV 200

Query: 247 RLLSPVGLNRAMELASMVEEKNKVVLRGKSVKAYTSTKKVFEGGSEEKWSAGRPNAAPT 71
             +  VGL   ME A + EEK +V   G     Y+        GS  K     P    T
Sbjct: 201 FAMRVVGLEDLMEAAQLAEEKAEVTKGGPYPYPYSKEAAKTNLGSSPKTFGSPPTKMVT 259



 Score = 30.4 bits (67), Expect(2) = 2e-15
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -1

Query: 62  PEYRRLYDQELQAKRQQGLC 3
           P YRR  D +LQA++++GLC
Sbjct: 287 PSYRRWIDSKLQARKEKGLC 306


>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
           gi|223527635|gb|EEF29747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 462

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 38/85 (44%), Positives = 63/85 (74%)
 Frame = -2

Query: 427 FRTTAEGSLCEQFLAVREEGTVADYKRRFVAMAAPLEGITEEMFVGQFINGLTPDLRAEV 248
           FR+T EG+L +Q LA+++  TV +++R+F  +AAPL+G+ E++    F+NGL PD++AE+
Sbjct: 178 FRSTQEGTLHDQLLALKQTTTVKEFRRQFEIIAAPLKGLAEDVLEAAFVNGLRPDMQAEL 237

Query: 247 RLLSPVGLNRAMELASMVEEKNKVV 173
           R  SP GL++ M++A  +EEK K +
Sbjct: 238 RQWSPFGLDKKMQVAQKIEEKLKAL 262


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 39/81 (48%), Positives = 56/81 (69%)
 Frame = -2

Query: 427 FRTTAEGSLCEQFLAVREEGTVADYKRRFVAMAAPLEGITEEMFVGQFINGLTPDLRAEV 248
           FR TA GSL EQ+L+  +E  V +Y+R+F+ + APLEGI E +   QF++ L  +++ EV
Sbjct: 172 FRETALGSLQEQWLSHEQEEGVVEYRRKFIELLAPLEGIPESIAQAQFVSKLKEEIKNEV 231

Query: 247 RLLSPVGLNRAMELASMVEEK 185
           R++ P  L+ AMELA  VEEK
Sbjct: 232 RIMGPSSLDHAMELAVQVEEK 252


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