BLASTX nr result

ID: Atractylodes21_contig00035516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035516
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269865.1| PREDICTED: uncharacterized protein LOC100241...   122   2e-26
emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]   122   2e-26
ref|XP_004166522.1| PREDICTED: TATA box-binding protein-associat...   117   1e-24
ref|XP_004152882.1| PREDICTED: TATA box-binding protein-associat...   117   1e-24
gb|AAK91899.2|AC091627_12 hypothetical protein SDM1_2t00007 [Sol...   115   4e-24

>ref|XP_002269865.1| PREDICTED: uncharacterized protein LOC100241425 [Vitis vinifera]
          Length = 722

 Score =  122 bits (307), Expect = 2e-26
 Identities = 74/150 (49%), Positives = 89/150 (59%), Gaps = 18/150 (12%)
 Frame = +3

Query: 6   VCGFVGLDDGSDGFFYCQRCGSQADGIRDTAVDNDEMLLTKENVGGIV------QRRVPV 167
           VCG VG  DG+DGFFYC RCGSQA+ I DT V  ++ +   +  G I       QR    
Sbjct: 11  VCGSVGFSDGADGFFYCGRCGSQAEDIIDTGVAEEDFVAKGDARGAIYSASHRRQRHSIA 70

Query: 168 VKAEPLSQSQPPSQFWETLRTQED---------DAEAGDGVGPTEPIDFG---RGPRTLS 311
            K EPLSQSQ  SQF   L   +D         +    D VGP+ P DFG    G   LS
Sbjct: 71  PKPEPLSQSQ--SQFLNNLTLDDDYRVENEETREETVADEVGPSGPSDFGLGLDGSDGLS 128

Query: 312 YEDYYSEIRMRYVMGVQIMIELQIKALVEK 401
           +EDYY+++R+RYVMGVQIMIELQ +ALVEK
Sbjct: 129 FEDYYTQLRIRYVMGVQIMIELQCQALVEK 158


>emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]
          Length = 722

 Score =  122 bits (307), Expect = 2e-26
 Identities = 74/150 (49%), Positives = 89/150 (59%), Gaps = 18/150 (12%)
 Frame = +3

Query: 6   VCGFVGLDDGSDGFFYCQRCGSQADGIRDTAVDNDEMLLTKENVGGIV------QRRVPV 167
           VCG VG  DG+DGFFYC RCGSQA+ I DT V  ++ +   +  G I       QR    
Sbjct: 11  VCGSVGFSDGADGFFYCGRCGSQAEDIIDTGVAEEDFVAKGDARGAIYSASHRRQRHSIA 70

Query: 168 VKAEPLSQSQPPSQFWETLRTQED---------DAEAGDGVGPTEPIDFG---RGPRTLS 311
            K EPLSQSQ  SQF   L   +D         +    D VGP+ P DFG    G   LS
Sbjct: 71  PKPEPLSQSQ--SQFLNNLTLDDDYRVENEETREETVADEVGPSGPSDFGLGLDGSDGLS 128

Query: 312 YEDYYSEIRMRYVMGVQIMIELQIKALVEK 401
           +EDYY+++R+RYVMGVQIMIELQ +ALVEK
Sbjct: 129 FEDYYTQLRIRYVMGVQIMIELQCQALVEK 158


>ref|XP_004166522.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like [Cucumis sativus]
          Length = 735

 Score =  117 bits (293), Expect = 1e-24
 Identities = 70/158 (44%), Positives = 92/158 (58%), Gaps = 27/158 (17%)
 Frame = +3

Query: 9   CGFVGLDDGSDGFFYCQRCGSQADGIRDTAVDNDEMLLTKENVGGI-------VQRRVP- 164
           CG +GL DG DGFFYC +CGSQAD I DT V  ++++L      G         +RR P 
Sbjct: 12  CGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLVLRDVGKSGAPIYSQSHTRRRNPT 71

Query: 165 VVKAEPLSQSQ-----PPSQFWETLRTQEDDA-----------EAGDGVGPTEPIDFGRG 296
           V+K EPLSQSQ       S+FW++L   ED +              DGVGPT P DFG G
Sbjct: 72  VLKVEPLSQSQSLFGTSQSEFWDSLNLMEDPSGNVGGKDGDIVMLNDGVGPTGPEDFGSG 131

Query: 297 ---PRTLSYEDYYSEIRMRYVMGVQIMIELQIKALVEK 401
                  S+E+Y  E+RMRYVMG+Q+++ELQ + LV++
Sbjct: 132 DVLSGKPSFEEYADEVRMRYVMGLQLIMELQCEVLVKE 169


>ref|XP_004152882.1| PREDICTED: TATA box-binding protein-associated factor RNA
           polymerase I subunit B-like [Cucumis sativus]
          Length = 735

 Score =  117 bits (293), Expect = 1e-24
 Identities = 70/158 (44%), Positives = 92/158 (58%), Gaps = 27/158 (17%)
 Frame = +3

Query: 9   CGFVGLDDGSDGFFYCQRCGSQADGIRDTAVDNDEMLLTKENVGGI-------VQRRVP- 164
           CG +GL DG DGFFYC +CGSQAD I DT V  ++++L      G         +RR P 
Sbjct: 12  CGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLVLRDVGKSGAPIYSQSHTRRRNPT 71

Query: 165 VVKAEPLSQSQ-----PPSQFWETLRTQEDDA-----------EAGDGVGPTEPIDFGRG 296
           V+K EPLSQSQ       S+FW++L   ED +              DGVGPT P DFG G
Sbjct: 72  VLKVEPLSQSQSLFGTSQSEFWDSLNLMEDPSGNVGGKDGDIVMLNDGVGPTGPEDFGSG 131

Query: 297 ---PRTLSYEDYYSEIRMRYVMGVQIMIELQIKALVEK 401
                  S+E+Y  E+RMRYVMG+Q+++ELQ + LV++
Sbjct: 132 DVLSGKPSFEEYADEVRMRYVMGLQLIMELQCEVLVKE 169


>gb|AAK91899.2|AC091627_12 hypothetical protein SDM1_2t00007 [Solanum demissum]
          Length = 664

 Score =  115 bits (288), Expect = 4e-24
 Identities = 63/133 (47%), Positives = 79/133 (59%)
 Frame = +3

Query: 3   QVCGFVGLDDGSDGFFYCQRCGSQADGIRDTAVDNDEMLLTKENVGGIVQRRVPVVKAEP 182
           +VCG +  DDG DGFFYC RCGSQA  I DT VD+D+++    NV G             
Sbjct: 10  EVCGNLSFDDGGDGFFYCTRCGSQAVDIMDTGVDDDDLV----NVDG------------- 52

Query: 183 LSQSQPPSQFWETLRTQEDDAEAGDGVGPTEPIDFGRGPRTLSYEDYYSEIRMRYVMGVQ 362
              + P  + +E L    D+    DGVGP  P DFG    +L+Y DYYSEIR+RYVMG+Q
Sbjct: 53  -GTTLPAFRVFENL-DDYDERNGDDGVGPAVPSDFGSSQISLTYTDYYSEIRLRYVMGLQ 110

Query: 363 IMIELQIKALVEK 401
            MI++Q K LVEK
Sbjct: 111 AMIQMQCKTLVEK 123


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