BLASTX nr result

ID: Atractylodes21_contig00035482 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035482
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEP33765.1| organelle transcript processing 82, partial [Lepi...    89   5e-16
gb|ADE76509.1| unknown [Picea sitchensis]                              88   6e-16
ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    85   7e-15
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14

>gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 39/73 (53%), Positives = 56/73 (76%)
 Frame = +1

Query: 1   LMSNIYATAGKWDQVAKMRRNIKDRKLEKAPGWSSIEVAGQIHTFLVSDQSHPRSREIYR 180
           L+SNIYATAG+WDQVAK+R  + D+ ++KAPG SSIE+   +H F++ D+ HPR+REIYR
Sbjct: 508 LLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYR 567

Query: 181 YLKDIKERMRAEG 219
            L++++  M   G
Sbjct: 568 MLEEMEMLMEETG 580


>gb|ADE76509.1| unknown [Picea sitchensis]
          Length = 246

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 39/73 (53%), Positives = 56/73 (76%)
 Frame = +1

Query: 1   LMSNIYATAGKWDQVAKMRRNIKDRKLEKAPGWSSIEVAGQIHTFLVSDQSHPRSREIYR 180
           L+SNIYA AG+WD VAK+R+ +KDR ++K PG S IEV  ++HTF+V D+SHP++ EIY 
Sbjct: 82  LLSNIYAAAGRWDDVAKVRKIMKDRGVQKQPGCSWIEVKNKVHTFMVEDKSHPQTEEIYS 141

Query: 181 YLKDIKERMRAEG 219
            L+++  +M A G
Sbjct: 142 TLEELARQMEAAG 154


>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 37/73 (50%), Positives = 57/73 (78%)
 Frame = +1

Query: 1   LMSNIYATAGKWDQVAKMRRNIKDRKLEKAPGWSSIEVAGQIHTFLVSDQSHPRSREIYR 180
           L++NIYA+ G WD VAK+RR++K+  ++K PG S IE+  +++TF+V D+SHPRS+EIY 
Sbjct: 699 LLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRSKEIYV 758

Query: 181 YLKDIKERMRAEG 219
            L D++ER+ + G
Sbjct: 759 KLDDLRERLTSAG 771


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 36/73 (49%), Positives = 54/73 (73%)
 Frame = +1

Query: 1   LMSNIYATAGKWDQVAKMRRNIKDRKLEKAPGWSSIEVAGQIHTFLVSDQSHPRSREIYR 180
           L+SNIYA AGKWD VA++R  + DR ++K PG ++IEV   +H FLV D+ HP+S +IYR
Sbjct: 570 LLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYR 629

Query: 181 YLKDIKERMRAEG 219
            L+++ E+++  G
Sbjct: 630 MLEEVDEQLKVFG 642


>ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|222850518|gb|EEE88065.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/73 (57%), Positives = 53/73 (72%)
 Frame = +1

Query: 1   LMSNIYATAGKWDQVAKMRRNIKDRKLEKAPGWSSIEVAGQIHTFLVSDQSHPRSREIYR 180
           L+SNIYA AGKWD V+++R+++K   LEK PG SSIEV G IH FLV D SHP S EIY 
Sbjct: 573 LLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNSHPLSTEIYS 632

Query: 181 YLKDIKERMRAEG 219
            L +I  R+++ G
Sbjct: 633 KLDEIVARIKSTG 645


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