BLASTX nr result

ID: Atractylodes21_contig00035458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035458
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_179632.1| Succinyl-CoA ligase [GDP-forming] subunit beta ...   132   4e-29
ref|XP_002884202.1| hypothetical protein ARALYDRAFT_480870 [Arab...   132   4e-29
gb|AAM65138.1| succinyl-CoA ligase beta subunit [Arabidopsis tha...   132   4e-29
ref|XP_002320625.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_002529830.1| succinyl-CoA synthetase beta chain, putative...   127   7e-28

>ref|NP_179632.1| Succinyl-CoA ligase [GDP-forming] subunit beta [Arabidopsis
           thaliana] gi|21264030|sp|O82662.1|SUCB_ARATH RecName:
           Full=Succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial; AltName: Full=Succinyl-CoA synthetase
           beta chain; Short=SCS-beta; Flags: Precursor
           gi|3660469|emb|CAA05024.1| succinyl-CoA-ligase beta
           subunit [Arabidopsis thaliana]
           gi|20197853|gb|AAM15283.1| succinyl-CoA ligase beta
           subunit [Arabidopsis thaliana]
           gi|20466482|gb|AAM20558.1| succinyl-CoA ligase beta
           subunit [Arabidopsis thaliana]
           gi|22136422|gb|AAM91289.1| succinyl-CoA ligase beta
           subunit [Arabidopsis thaliana]
           gi|330251911|gb|AEC07005.1| Succinyl-CoA ligase
           [GDP-forming] subunit beta [Arabidopsis thaliana]
          Length = 421

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/78 (82%), Positives = 70/78 (89%)
 Frame = -2

Query: 234 QQLRRLNVHEYQGAELMNKFGINVPKGVAASSAADVRKAIQSTFPNEKELVVKSQILAGG 55
           QQLRRLN+HEYQGAELM K+G+NVPKGVAASS  +V+KAIQ  FPNE ELVVKSQILAGG
Sbjct: 22  QQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQILAGG 81

Query: 54  RGLGKFTSGLQGGVHIVK 1
           RGLG F SGL+GGVHIVK
Sbjct: 82  RGLGTFKSGLKGGVHIVK 99


>ref|XP_002884202.1| hypothetical protein ARALYDRAFT_480870 [Arabidopsis lyrata subsp.
           lyrata] gi|297330042|gb|EFH60461.1| hypothetical protein
           ARALYDRAFT_480870 [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/78 (82%), Positives = 70/78 (89%)
 Frame = -2

Query: 234 QQLRRLNVHEYQGAELMNKFGINVPKGVAASSAADVRKAIQSTFPNEKELVVKSQILAGG 55
           QQLRRLN+HEYQGAELM K+G+NVPKGVAASS  +V+KAIQ  FPNE ELVVKSQILAGG
Sbjct: 22  QQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQEVFPNESELVVKSQILAGG 81

Query: 54  RGLGKFTSGLQGGVHIVK 1
           RGLG F SGL+GGVHIVK
Sbjct: 82  RGLGTFKSGLKGGVHIVK 99


>gb|AAM65138.1| succinyl-CoA ligase beta subunit [Arabidopsis thaliana]
          Length = 421

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/78 (82%), Positives = 70/78 (89%)
 Frame = -2

Query: 234 QQLRRLNVHEYQGAELMNKFGINVPKGVAASSAADVRKAIQSTFPNEKELVVKSQILAGG 55
           QQLRRLN+HEYQGAELM K+G+NVPKGVAASS  +V+KAIQ  FPNE ELVVKSQILAGG
Sbjct: 22  QQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQILAGG 81

Query: 54  RGLGKFTSGLQGGVHIVK 1
           RGLG F SGL+GGVHIVK
Sbjct: 82  RGLGTFKSGLKGGVHIVK 99


>ref|XP_002320625.1| predicted protein [Populus trichocarpa] gi|222861398|gb|EEE98940.1|
           predicted protein [Populus trichocarpa]
          Length = 421

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/78 (78%), Positives = 68/78 (87%)
 Frame = -2

Query: 234 QQLRRLNVHEYQGAELMNKFGINVPKGVAASSAADVRKAIQSTFPNEKELVVKSQILAGG 55
           QQLRRLN+HEYQGAELM K+G+NVPKGVA SS  +V+KAIQ  FP E ELVVKSQ+LAGG
Sbjct: 22  QQLRRLNIHEYQGAELMGKYGVNVPKGVAVSSLDEVKKAIQDVFPGESELVVKSQVLAGG 81

Query: 54  RGLGKFTSGLQGGVHIVK 1
           RGLGKF +G QGGVHIVK
Sbjct: 82  RGLGKFKNGFQGGVHIVK 99


>ref|XP_002529830.1| succinyl-CoA synthetase beta chain, putative [Ricinus communis]
           gi|223530658|gb|EEF32531.1| succinyl-CoA synthetase beta
           chain, putative [Ricinus communis]
          Length = 425

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/78 (78%), Positives = 71/78 (91%)
 Frame = -2

Query: 234 QQLRRLNVHEYQGAELMNKFGINVPKGVAASSAADVRKAIQSTFPNEKELVVKSQILAGG 55
           QQLRRLN+HEYQGA+LM+K+GINVPKGVAA+S  +VRKAIQ  FP++ ELVVKSQILAGG
Sbjct: 22  QQLRRLNIHEYQGADLMSKYGINVPKGVAAASIDEVRKAIQDVFPDKSELVVKSQILAGG 81

Query: 54  RGLGKFTSGLQGGVHIVK 1
           RGLGKF +G +GGVHIVK
Sbjct: 82  RGLGKFKNGFEGGVHIVK 99


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