BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035441
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   208   5e-52
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              208   5e-52
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   192   4e-47
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me...   172   6e-41
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   172   6e-41

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  208 bits (530), Expect = 5e-52
 Identities = 103/208 (49%), Positives = 141/208 (67%), Gaps = 5/208 (2%)
 Frame = -1

Query: 609  DKLEGTIDALSWGKVPALGTGGRFDILFSGKEHEIDKPENVYSLLSKSIDSHEE--KVVV 436
            D L G++DAL+WGK+P++G+GG FDIL+S K HE+ +PE++Y LL      HE+  KV V
Sbjct: 1279 DNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKV 1338

Query: 435  PVENGNHTSNKDPAPLYPYHNFAANGSP---EIMKTVLKKHISAEDIKRLSKDLKHILYK 265
            P+     T+      +Y   + A+ G     +I K+VL+  +S  DI++LS+ LK IL K
Sbjct: 1339 PITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQK 1398

Query: 264  YDVNHKLSQDDKLVAWKALFFHPRRDEKIGIGLYEIKVGYHSQHGSSRCFVLERVDGTME 85
            Y +NH+LS+ DK     AL+FHPRRDEKIG G   IKV YHS++ ++RCF L R DGT E
Sbjct: 1399 YPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEE 1458

Query: 84   DFSYHKCIHHALKLIAPNEAKIYESRWL 1
            DFSYHKC+H AL++I P  A+ Y+SRWL
Sbjct: 1459 DFSYHKCVHGALEIIDPRRARSYQSRWL 1486


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  208 bits (530), Expect = 5e-52
 Identities = 103/208 (49%), Positives = 141/208 (67%), Gaps = 5/208 (2%)
 Frame = -1

Query: 609  DKLEGTIDALSWGKVPALGTGGRFDILFSGKEHEIDKPENVYSLLSKSIDSHEE--KVVV 436
            D L G++DAL+WGK+P++G+GG FDIL+S K HE+ +PE++Y LL      HE+  KV V
Sbjct: 1137 DNLHGSLDALAWGKIPSVGSGGHFDILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKV 1196

Query: 435  PVENGNHTSNKDPAPLYPYHNFAANGSP---EIMKTVLKKHISAEDIKRLSKDLKHILYK 265
            P+     T+      +Y   + A+ G     +I K+VL+  +S  DI++LS+ LK IL K
Sbjct: 1197 PITCYQTTTKCGAQLVYANGDSASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQK 1256

Query: 264  YDVNHKLSQDDKLVAWKALFFHPRRDEKIGIGLYEIKVGYHSQHGSSRCFVLERVDGTME 85
            Y +NH+LS+ DK     AL+FHPRRDEKIG G   IKV YHS++ ++RCF L R DGT E
Sbjct: 1257 YPINHQLSEIDKTTLMMALYFHPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEE 1316

Query: 84   DFSYHKCIHHALKLIAPNEAKIYESRWL 1
            DFSYHKC+H AL++I P  A+ Y+SRWL
Sbjct: 1317 DFSYHKCVHGALEIIDPRRARSYQSRWL 1344


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  192 bits (488), Expect = 4e-47
 Identities = 94/207 (45%), Positives = 140/207 (67%), Gaps = 4/207 (1%)
 Frame = -1

Query: 609  DKLEGTIDALSWGKVPALGTGGRFDILFSGKEHEIDKPENVYSLLSKSIDSHEEKVVVPV 430
            D L G++DAL+WG++P+LGTGG+FDIL+SGK HE++KP +VY+LL       ++   +  
Sbjct: 1258 DNLSGSLDALAWGRMPSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNTKIES 1317

Query: 429  ENGNHTSNKDPAPLYPYHNFAA----NGSPEIMKTVLKKHISAEDIKRLSKDLKHILYKY 262
             + N  S K  A L   +  +          + K++L+K ++  DI++LS  L+ IL+KY
Sbjct: 1318 LDKNTISEKYSAQLMLKNGGSTIKGLKRLDSVSKSILRKFLTLNDIQKLSFALRTILHKY 1377

Query: 261  DVNHKLSQDDKLVAWKALFFHPRRDEKIGIGLYEIKVGYHSQHGSSRCFVLERVDGTMED 82
             +N +L++ DK     AL+FHP RDEKIG+G  +IKVG HS++ ++RCFVL R DGT ED
Sbjct: 1378 SLNERLNEVDKSTLMMALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTED 1437

Query: 81   FSYHKCIHHALKLIAPNEAKIYESRWL 1
            FSYHKC+  AL++IAP+  K Y+S+W+
Sbjct: 1438 FSYHKCVLGALEIIAPHRVKGYQSKWM 1464


>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1687

 Score =  172 bits (435), Expect = 6e-41
 Identities = 87/202 (43%), Positives = 128/202 (63%)
 Frame = -1

Query: 609  DKLEGTIDALSWGKVPALGTGGRFDILFSGKEHEIDKPENVYSLLSKSIDSHEEKVVVPV 430
            D L+G +DAL+WG    +GTGG+FDI++S K  EI+K  +VY LL  S +  ++++ +P 
Sbjct: 1432 DNLQGNLDALAWGNCLPMGTGGQFDIIYSEKVEEINKSVDVYGLLETSFNQMDQEINIP- 1490

Query: 429  ENGNHTSNKDPAPLYPYHNFAANGSPEIMKTVLKKHISAEDIKRLSKDLKHILYKYDVNH 250
            ++  ++S K  +     +       P+  K+VL+  ++A DI+RL+ D + IL KY ++ 
Sbjct: 1491 QSRKYSSGKCSSDFRSKNGGYTPKEPKQWKSVLRNFMTANDIQRLTFDARVILNKYQIDE 1550

Query: 249  KLSQDDKLVAWKALFFHPRRDEKIGIGLYEIKVGYHSQHGSSRCFVLERVDGTMEDFSYH 70
             LS+ DKL   K L FHPRRDEK G G   IKVG+H +   SRCF + R DG++EDFSY 
Sbjct: 1551 TLSETDKLTIMKVLHFHPRRDEKFGSGPQNIKVGWHPEFTDSRCFFIIRKDGSVEDFSYR 1610

Query: 69   KCIHHALKLIAPNEAKIYESRW 4
            KCI  AL +I P ++KI  +RW
Sbjct: 1611 KCILGALDIIDPKKSKIQRNRW 1632


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
            gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
            [Populus trichocarpa]
          Length = 1517

 Score =  172 bits (435), Expect = 6e-41
 Identities = 95/210 (45%), Positives = 136/210 (64%), Gaps = 7/210 (3%)
 Frame = -1

Query: 609  DKLEGTIDALSWGKVPALGTGGRFDILFSGKEHEIDKPENVYSLLSKSIDSHEEKVVVPV 430
            D L+G+IDAL+WGKVPA+GTG +FDI++SGK  E  KP +VY+LL   + S E+     V
Sbjct: 1292 DDLQGSIDALAWGKVPAIGTG-QFDIVYSGKGLEFSKPVDVYNLLGSQMISTEQNTEFGV 1350

Query: 429  ENGN-HTSNKDPAPLYPYHNFAANG------SPEIMKTVLKKHISAEDIKRLSKDLKHIL 271
             +   + S+K  A     H F   G         I ++ L++ ++ +DI+R+S  ++ IL
Sbjct: 1351 LDAQIYKSDKCGAQFL--HKFGGCGPKGFKVKEGIPRSFLRRLLTYDDIQRMSYTVRKIL 1408

Query: 270  YKYDVNHKLSQDDKLVAWKALFFHPRRDEKIGIGLYEIKVGYHSQHGSSRCFVLERVDGT 91
             KY V+ +L++ DK V    L+FHPRRDEKIGIG  +IKV  H ++  +RCF L R DGT
Sbjct: 1409 NKYSVDQQLNESDKSVLMMTLYFHPRRDEKIGIGAKDIKVINHPEYQDTRCFSLVRTDGT 1468

Query: 90   MEDFSYHKCIHHALKLIAPNEAKIYESRWL 1
            +EDFSY KC+H+AL++IAP  AK Y  ++L
Sbjct: 1469 IEDFSYRKCLHNALEIIAPQRAKRYCEKYL 1498