BLASTX nr result

ID: Atractylodes21_contig00035385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035385
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510592.1| ring finger protein, putative [Ricinus commu...   188   5e-46
ref|XP_002306953.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45
ref|XP_002301951.1| predicted protein [Populus trichocarpa] gi|2...   182   4e-44
emb|CBI18928.3| unnamed protein product [Vitis vinifera]              177   9e-43
ref|XP_002285896.1| PREDICTED: E3 ubiquitin-protein ligase ATL23...   176   3e-42

>ref|XP_002510592.1| ring finger protein, putative [Ricinus communis]
           gi|223551293|gb|EEF52779.1| ring finger protein,
           putative [Ricinus communis]
          Length = 175

 Score =  188 bits (478), Expect = 5e-46
 Identities = 85/131 (64%), Positives = 103/131 (78%), Gaps = 2/131 (1%)
 Frame = -2

Query: 532 MMLSVFLALFLPCAGMSAVFLVYISLLCYAARHYQPTN--APTKPATENGLSSAQLQKLP 359
           M+LSVFLALFLPC GMSA+FL+YI LL YAA H+  +    P KP+ E GLS++ L+KLP
Sbjct: 45  MLLSVFLALFLPCVGMSAIFLIYICLLWYAANHHHHSEIVTPVKPSAEKGLSASDLEKLP 104

Query: 358 ITTGKDLVLGMECAVCLDDVEPEQPARMFPGCNHGFHLQCADTWLSKNPVCPICRNKLDA 179
             TGK+L+LG ECAVCLD++E EQPAR+ PGCNHGFHL+CADTWLS + VCP+CR KLD+
Sbjct: 105 KMTGKELILGTECAVCLDEIESEQPARLVPGCNHGFHLECADTWLSNHSVCPVCRAKLDS 164

Query: 178 DFFVPPETNPC 146
            FF     NPC
Sbjct: 165 QFFNASTDNPC 175


>ref|XP_002306953.1| predicted protein [Populus trichocarpa] gi|222856402|gb|EEE93949.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score =  187 bits (474), Expect = 1e-45
 Identities = 89/134 (66%), Positives = 101/134 (75%), Gaps = 5/134 (3%)
 Frame = -2

Query: 532 MMLSVFLALFLPCAGMSAVFLVYISLLCYAARHYQPTNAPTKPATENGLSSAQLQKLPIT 353
           M++SVFLALFLPCAGMSAVF+VYI LL Y A +      P K  TE GLSS++L+KLP  
Sbjct: 1   MLVSVFLALFLPCAGMSAVFIVYICLLWYTANNQPEIRLPVKTVTEKGLSSSELEKLPKV 60

Query: 352 TGKDLVLGMECAVCLDDVEPEQPARMFPGCNHGFHLQCADTWLSKNPVCPICRNKLDADF 173
           TGK+LVLG ECAVCLDD+E EQ ARM PGCNHGFHL+CADTWL+K PVCP+CR KLDA  
Sbjct: 61  TGKELVLGTECAVCLDDIESEQVARMVPGCNHGFHLECADTWLTKRPVCPVCRAKLDAQL 120

Query: 172 FVPP-----ETNPC 146
           F  P     E N C
Sbjct: 121 FSTPPPPAQENNTC 134


>ref|XP_002301951.1| predicted protein [Populus trichocarpa] gi|222843677|gb|EEE81224.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  182 bits (462), Expect = 4e-44
 Identities = 89/134 (66%), Positives = 102/134 (76%), Gaps = 5/134 (3%)
 Frame = -2

Query: 532 MMLSVFLALFLPCAGMSAVFLVYISLLCYAARHYQPTNAP--TKPATENGLSSAQLQKLP 359
           M++SV  ALFLPC GMS VF +YI LL YAA + QP N P   K  TE GLSS++L+KLP
Sbjct: 33  MLVSVLFALFLPCVGMSVVFFIYICLLWYAANN-QPENIPLPVKTVTEKGLSSSELEKLP 91

Query: 358 ITTGKDLVLGMECAVCLDDVEPEQPARMFPGCNHGFHLQCADTWLSKNPVCPICRNKLDA 179
             TGK+LVLG ECAVCLDD+E EQ AR+ PGCNHGFHL+CADTWLSK+PVCP+CR KLDA
Sbjct: 92  KVTGKELVLGTECAVCLDDIESEQLARIVPGCNHGFHLECADTWLSKHPVCPVCRAKLDA 151

Query: 178 DF---FVPPETNPC 146
            F      PE NPC
Sbjct: 152 QFSSTSASPENNPC 165


>emb|CBI18928.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  177 bits (450), Expect = 9e-43
 Identities = 86/131 (65%), Positives = 101/131 (77%), Gaps = 1/131 (0%)
 Frame = -2

Query: 535 TMMLSVFLALFLPCAGMSAVFLVYISLLCYAARHYQPT-NAPTKPATENGLSSAQLQKLP 359
           TM+LS+FLALFLPCAGMS VF+VYI LL Y+A   QP   AP KP +E GLS++ L KLP
Sbjct: 33  TMLLSIFLALFLPCAGMSVVFVVYICLLWYSALGQQPELPAPVKPESEKGLSASDLDKLP 92

Query: 358 ITTGKDLVLGMECAVCLDDVEPEQPARMFPGCNHGFHLQCADTWLSKNPVCPICRNKLDA 179
              GKDLV+G ECAVCLD++E + PAR+ PGCNHGFHLQCADTWLSK+ VCP+CR  L  
Sbjct: 93  KLAGKDLVVGAECAVCLDEIESDAPARLIPGCNHGFHLQCADTWLSKHSVCPLCRAILAP 152

Query: 178 DFFVPPETNPC 146
           +FF   E NPC
Sbjct: 153 EFFNTSE-NPC 162


>ref|XP_002285896.1| PREDICTED: E3 ubiquitin-protein ligase ATL23 [Vitis vinifera]
          Length = 129

 Score =  176 bits (445), Expect = 3e-42
 Identities = 85/130 (65%), Positives = 100/130 (76%), Gaps = 1/130 (0%)
 Frame = -2

Query: 532 MMLSVFLALFLPCAGMSAVFLVYISLLCYAARHYQPT-NAPTKPATENGLSSAQLQKLPI 356
           M+LS+FLALFLPCAGMS VF+VYI LL Y+A   QP   AP KP +E GLS++ L KLP 
Sbjct: 1   MLLSIFLALFLPCAGMSVVFVVYICLLWYSALGQQPELPAPVKPESEKGLSASDLDKLPK 60

Query: 355 TTGKDLVLGMECAVCLDDVEPEQPARMFPGCNHGFHLQCADTWLSKNPVCPICRNKLDAD 176
             GKDLV+G ECAVCLD++E + PAR+ PGCNHGFHLQCADTWLSK+ VCP+CR  L  +
Sbjct: 61  LAGKDLVVGAECAVCLDEIESDAPARLIPGCNHGFHLQCADTWLSKHSVCPLCRAILAPE 120

Query: 175 FFVPPETNPC 146
           FF   E NPC
Sbjct: 121 FFNTSE-NPC 129


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