BLASTX nr result

ID: Atractylodes21_contig00035360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035360
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated...    92   4e-17
ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated...    81   1e-13
ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated...    79   3e-13
ref|XP_003610454.1| U3 small nucleolar RNA-associated protein-li...    72   5e-11

>ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Vitis vinifera] gi|302144122|emb|CBI23227.3| unnamed
           protein product [Vitis vinifera]
          Length = 652

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/80 (53%), Positives = 60/80 (75%)
 Frame = -1

Query: 242 LFNAIQVFDEALKFVPSSTTFDLYLKFLMDTIDRNGHSQSSRLSDSPNNYIDPVSHVLMV 63
           L  A+QV++EALKF+PS+  F+LY KFLMD I     +++S    +  + +  +SH+LMV
Sbjct: 346 LQKAVQVYEEALKFLPSAVMFNLYTKFLMDAIVSREKTKNSEPFSTSEHTVGSLSHLLMV 405

Query: 62  YEKAQSMGCITEDLACQHVS 3
           YEKA++MGC+TEDLACQHVS
Sbjct: 406 YEKAENMGCLTEDLACQHVS 425


>ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 649

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
 Frame = -1

Query: 233 AIQVFDEALKFVPSSTTFDLYLKFLMDTI-DRNGHSQSSRLSDSPNNYIDPVSHVLMVYE 57
           A+QV++EALK VPS T F LY  FL D I  + G +  +  S    NYI   SH+L +YE
Sbjct: 348 AVQVYEEALKNVPSGTMFSLYANFLTDIIAPKEGETDINGSSGCAVNYI---SHLLSIYE 404

Query: 56  KAQSMGCITEDLACQHVS 3
           +A+SMGCITEDLAC+HVS
Sbjct: 405 RAESMGCITEDLACKHVS 422


>ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|222853643|gb|EEE91190.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/78 (53%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
 Frame = -1

Query: 233 AIQVFDEALKFVPSSTTFDLYLKFLMDTI-DRNGHSQSSRLSDSPNNYIDPVSHVLMVYE 57
           AIQV++EAL+F+PS   F+LY+KFLMD I  + G +  S++S    +YI   SH+L+VYE
Sbjct: 341 AIQVYEEALQFLPSPMMFNLYIKFLMDAIAPKGGENDPSKVSSPTEDYI---SHLLVVYE 397

Query: 56  KAQSMGCITEDLACQHVS 3
           KA  +G +TEDLACQ+VS
Sbjct: 398 KADVVGYMTEDLACQYVS 415


>ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 655

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/78 (52%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
 Frame = -1

Query: 233 AIQVFDEALKFVPSSTTFDLYLKFLMDTI-DRNGHSQSSRLSDSPNNYIDPVSHVLMVYE 57
           A+QV++EAL+ VPS T F LY  FL D +  + G +  +  S    NYI   SH+L++YE
Sbjct: 355 AVQVYEEALENVPSGTMFCLYANFLTDIVAHKEGETNINGSSGHAANYI---SHLLLIYE 411

Query: 56  KAQSMGCITEDLACQHVS 3
           +A+SMGCITEDLAC+HVS
Sbjct: 412 RAESMGCITEDLACKHVS 429


>ref|XP_003610454.1| U3 small nucleolar RNA-associated protein-like protein [Medicago
           truncatula] gi|355511509|gb|AES92651.1| U3 small
           nucleolar RNA-associated protein-like protein [Medicago
           truncatula]
          Length = 665

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 38/77 (49%), Positives = 50/77 (64%)
 Frame = -1

Query: 233 AIQVFDEALKFVPSSTTFDLYLKFLMDTIDRNGHSQSSRLSDSPNNYIDPVSHVLMVYEK 54
           AIQV++EALK VPS T F LY  FLM  +        +   + PN     +SH+L +YE+
Sbjct: 351 AIQVYEEALKSVPSGTMFSLYANFLMGIV--------APKDEEPNIDGPYISHLLSIYER 402

Query: 53  AQSMGCITEDLACQHVS 3
           A+SMG IT+DLAC+HVS
Sbjct: 403 AESMGIITDDLACKHVS 419


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