BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035353
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   303   3e-80
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...   292   9e-77
ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arab...   281   2e-73
ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-...   278   1e-72
ref|NP_194284.2| DNA mismatch repair protein Msh3 [Arabidopsis t...   277   3e-72

>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  303 bits (777), Expect = 3e-80
 Identities = 167/269 (62%), Positives = 195/269 (72%), Gaps = 21/269 (7%)
 Frame = +3

Query: 3    IMAQVGSFVPASSVKMHVLDGIYTRMGASDSIQQGRSTFLEELGETSHILHTCTGQSLVI 182
            IMAQVGSFVPASS K+ VLDGI+TRMG+SDSIQQGRSTFLEEL E SHI+H CT +SLVI
Sbjct: 842  IMAQVGSFVPASSAKLCVLDGIHTRMGSSDSIQQGRSTFLEELSEASHIIHNCTSRSLVI 901

Query: 183  LDELGRGTSTHDGVAIAYATLHYLLEQKKCMVLFVTHYPEIVNMTKGFTGRVGSYHVSYL 362
            +DELGRGTSTHDGVAIAYATLHYLLE K+CMVLFVTHYP+IV++   F G VG+YHVSY+
Sbjct: 902  IDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPKIVDVKNEFPGSVGAYHVSYM 961

Query: 363  TSQ----------TKNSNPNPKGENCDYEDVVYLYKLVPGVSERSFGFKVAQLAQLPLSC 512
             SQ            +S  +   +  D+EDV YLYKLVPGVSERSFGFKVAQLAQLP SC
Sbjct: 962  MSQRAMDMDTDTDKTDSKSDKNAQTMDHEDVTYLYKLVPGVSERSFGFKVAQLAQLPSSC 1021

Query: 513  INRAGVMAMKLEEAVSKRHKNRRTQKILQES----------GRNDETG-DTKALKEMFSD 659
            I RA VMA +LE  +  R KN   QK LQ S           R ++ G +  A +E F D
Sbjct: 1022 IRRANVMAAELEAMIVSRVKNSSAQKTLQGSQQSISIQSGCSRAEQIGLEEDACREFFLD 1081

Query: 660  LKLTSSEDVDPAKSLECLKRARSLALELI 746
            LK ++  + DP +SL+ LK ARS+A ELI
Sbjct: 1082 LK-SALGNADPERSLQFLKHARSIAKELI 1109


>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
            gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
            MSH3, putative [Ricinus communis]
          Length = 1100

 Score =  292 bits (747), Expect = 9e-77
 Identities = 164/271 (60%), Positives = 195/271 (71%), Gaps = 21/271 (7%)
 Frame = +3

Query: 3    IMAQVGSFVPASSVKMHVLDGIYTRMGASDSIQQGRSTFLEELGETSHILHTCTGQSLVI 182
            +MAQVGSFVPASS K+HVLDGIYTRMGASDSIQQGRSTFLEEL ETSHIL  CTG SLVI
Sbjct: 833  MMAQVGSFVPASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILRKCTGYSLVI 892

Query: 183  LDELGRGTSTHDGVAIAYATLHYLLEQKKCMVLFVTHYPEIVNMTKGFTGRVGSYHVSYL 362
            +DELGRGTSTHDG AIAYATL +LLEQK+CMVLFVTHYP+I N+  GF   VG+YHVSYL
Sbjct: 893  IDELGRGTSTHDGEAIAYATLCHLLEQKRCMVLFVTHYPKIANIRTGFLNSVGAYHVSYL 952

Query: 363  TSQTKNSNPNPKGENCDYEDVVYLYKLVPGVSERSFGFKVAQLAQLPLSCINRAGVMAMK 542
             ++  N   + K +N   EDV YLYKLVPGVSERSFGFKVAQLAQLP SCI RA VMA +
Sbjct: 953  MAEKNNDATDSKFDN---EDVTYLYKLVPGVSERSFGFKVAQLAQLPTSCIERATVMAAR 1009

Query: 543  LEEAVSKRHKNRRTQKILQESGRNDETGD-TKALKEM---FSDLKLTSSEDV-------- 686
            LEEA+S R +NR  +  L ++ + D+  +  + + E    F D ++ + E++        
Sbjct: 1010 LEEAISCRIRNRLDKSQLLKALQIDQLQEIQEKIPESPGNFHDKRIENYEELNNTYEKFF 1069

Query: 687  ---------DPAKSLECLKRARSLALELINR 752
                     D AKS + L+ ARS+A  LI R
Sbjct: 1070 LNFKSALLGDDAKSFQYLENARSIARALIKR 1100


>ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
            lyrata] gi|297313441|gb|EFH43864.1| hypothetical protein
            ARALYDRAFT_492273 [Arabidopsis lyrata subsp. lyrata]
          Length = 1078

 Score =  281 bits (719), Expect = 2e-73
 Identities = 154/250 (61%), Positives = 180/250 (72%), Gaps = 6/250 (2%)
 Frame = +3

Query: 3    IMAQVGSFVPASSVKMHVLDGIYTRMGASDSIQQGRSTFLEELGETSHILHTCTGQSLVI 182
            IMAQVGSFVPASSVK+HVLDG++TRMGASDSIQ GRSTFLEEL E SHI+ TC+ +SLVI
Sbjct: 833  IMAQVGSFVPASSVKLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHIIRTCSSRSLVI 892

Query: 183  LDELGRGTSTHDGVAIAYATLHYLLEQKKCMVLFVTHYPEIVNMTKGFTGRVGSYHVSYL 362
            LDELGRGTSTHDGVAIAYATL +LL +K+C+VLFVTHYPEI  ++ GF G VG+YHVSYL
Sbjct: 893  LDELGRGTSTHDGVAIAYATLQHLLLEKRCLVLFVTHYPEIAEISNGFRGSVGTYHVSYL 952

Query: 363  TSQTKNSNPNPKGENCDYEDVVYLYKLVPGVSERSFGFKVAQLAQLPLSCINRAGVMAMK 542
            TSQ K S         D++DV YLYKLV G+  RSFGFKVAQLAQ+P SCI RA  M  K
Sbjct: 953  TSQKKKS-------GFDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPSSCIRRAISMGAK 1005

Query: 543  LEEAVSKRHKNRR---TQKILQESGRNDETG---DTKALKEMFSDLKLTSSEDVDPAKSL 704
            LE  V  R +N R    +   +     D TG      AL ++F+DLK   SE+ DP K+ 
Sbjct: 1006 LEAEVGARERNTRMGEAEGHEEHGAPGDWTGAEESISALGDLFADLKFALSEE-DPWKAF 1064

Query: 705  ECLKRARSLA 734
            E L  A  +A
Sbjct: 1065 EFLNHAWKIA 1074


>ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-like [Glycine max]
          Length = 1070

 Score =  278 bits (711), Expect = 1e-72
 Identities = 159/264 (60%), Positives = 192/264 (72%), Gaps = 14/264 (5%)
 Frame = +3

Query: 3    IMAQVGSFVPASSVKMHVLDGIYTRMGASDSIQQGRSTFLEELGETSHILHTCTGQSLVI 182
            IMAQVGSFVPASS K+HVLD IYTRMGASDSIQ GRSTFLEEL ETSHIL++CT  SLVI
Sbjct: 809  IMAQVGSFVPASSAKLHVLDRIYTRMGASDSIQLGRSTFLEELSETSHILNSCTEHSLVI 868

Query: 183  LDELGRGTSTHDGVAIAYATLHYLLEQKKCMVLFVTHYPEIVNMTKGFTGRVGSYHVSYL 362
            +DELGRGTSTHDG+AIA+ATLHYLL+QK+ MVLFVTHYP+I ++   F G V +YHVS+L
Sbjct: 869  IDELGRGTSTHDGMAIAHATLHYLLKQKRSMVLFVTHYPKIASLATEFPGSVAAYHVSHL 928

Query: 363  TSQTKNSNPNPKGENCDYEDVVYLYKLVPGVSERSFGFKVAQLAQLPLSCINRAGVMAMK 542
             S   + N      N D+ DV YLYKLVPGVSERSFGFKVAQLAQLP  CI+RA VMA K
Sbjct: 929  ISHDASKN-----SNLDH-DVTYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASK 982

Query: 543  LEEAVSKRHKNRRTQKILQES---GRNDETGDTKAL-----------KEMFSDLKLTSSE 680
            LE  V+ R   R T+++L ++   G+  E    ++L           K+ + +LK  ++E
Sbjct: 983  LEALVNSRIHGRSTKELLLDTLVIGQEKEQLMAQSLDRPHKEFDMAYKDFYLNLK-AATE 1041

Query: 681  DVDPAKSLECLKRARSLALELINR 752
            D D AKS   L+ ARS+A +LI R
Sbjct: 1042 DDDWAKSFHLLEHARSIAKKLIGR 1065


>ref|NP_194284.2| DNA mismatch repair protein Msh3 [Arabidopsis thaliana]
            gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA
            mismatch repair protein MSH3; Short=AtMSH3; AltName:
            Full=MutS protein homolog 3 gi|3319876|emb|CAA07684.1|
            Msh3 protein [Arabidopsis thaliana]
            gi|332659675|gb|AEE85075.1| DNA mismatch repair protein
            Msh3 [Arabidopsis thaliana]
          Length = 1081

 Score =  277 bits (708), Expect = 3e-72
 Identities = 154/258 (59%), Positives = 186/258 (72%), Gaps = 3/258 (1%)
 Frame = +3

Query: 3    IMAQVGSFVPASSVKMHVLDGIYTRMGASDSIQQGRSTFLEELGETSHILHTCTGQSLVI 182
            IMAQVGSFVPAS  K+HVLDG++TRMGASDSIQ GRSTFLEEL E SHI+ TC+ +SLVI
Sbjct: 835  IMAQVGSFVPASFAKLHVLDGVFTRMGASDSIQHGRSTFLEELSEASHIIRTCSSRSLVI 894

Query: 183  LDELGRGTSTHDGVAIAYATLHYLLEQKKCMVLFVTHYPEIVNMTKGFTGRVGSYHVSYL 362
            LDELGRGTSTHDGVAIAYATL +LL +K+C+VLFVTHYPEI  ++ GF G VG+YHVSYL
Sbjct: 895  LDELGRGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYL 954

Query: 363  TSQTKNSNPNPKGENCDYEDVVYLYKLVPGVSERSFGFKVAQLAQLPLSCINRAGVMAMK 542
            T Q        KG + D++DV YLYKLV G+  RSFGFKVAQLAQ+P SCI RA  MA K
Sbjct: 955  TLQ------KDKG-SYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCIRRAISMAAK 1007

Query: 543  LEEAVSKRHKNRRTQKILQESGRNDETG---DTKALKEMFSDLKLTSSEDVDPAKSLECL 713
            LE  V  R +N R   + +  G  +  G      AL ++F+DLK   SE+ DP K+ E L
Sbjct: 1008 LEAEVRARERNTR---MGEPEGHEEPRGAEESISALGDLFADLKFALSEE-DPWKAFEFL 1063

Query: 714  KRARSLALELINR*TTTF 767
            K A  +A ++  + T +F
Sbjct: 1064 KHAWKIAGKIRLKPTCSF 1081