BLASTX nr result

ID: Atractylodes21_contig00035337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035337
         (1187 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding...   622   e-176
emb|CBI16626.3| unnamed protein product [Vitis vinifera]              620   e-175
ref|XP_002326827.1| hypothetical protein POPTRDRAFT_781297 [Popu...   596   e-168
ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223...   583   e-164
ref|XP_002326828.1| chromatin remodeling complex subunit [Populu...   581   e-163

>ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
            vinifera]
          Length = 876

 Score =  622 bits (1604), Expect = e-176
 Identities = 314/395 (79%), Positives = 350/395 (88%)
 Frame = -2

Query: 1186 EMGLGKTLQAISFLSYLKFCRGLHGPFLILCPLSVTDGWVSEITKFAPKLKVLRYVGDKQ 1007
            EMGLGKTLQAISFLSY+K  +   GPFL+LCPLSVTDGWVSEI  FAPKL+VLRYVGDK+
Sbjct: 63   EMGLGKTLQAISFLSYMKVHQKSPGPFLVLCPLSVTDGWVSEIANFAPKLRVLRYVGDKE 122

Query: 1006 YRRALRREMYGSVEKQSSSSNVPALPFDVLLTTYDIALIDQDFLSQIPWHYAVIDEAQRL 827
            +RR+LRR +Y  V++Q S S+V ALPFD+LLTTYDIAL+DQ FLSQIPWHYA+IDEAQRL
Sbjct: 123  HRRSLRRTIYEQVKEQCSKSDVSALPFDLLLTTYDIALMDQHFLSQIPWHYAIIDEAQRL 182

Query: 826  KNPSSVLYNVLRERYIMPRRLLMTGTPIQNSLNELWALLQFSMASIFGTLEQFCSTFKEG 647
            KNPSSVLYNVL+ER++MPRRLLMTGTPIQN+L ELWAL+ F M SIFGTLEQF STFKE 
Sbjct: 183  KNPSSVLYNVLKERFVMPRRLLMTGTPIQNNLTELWALMHFCMPSIFGTLEQFLSTFKED 242

Query: 646  GDLLSGKGAPIVKEKFKSLKYILGAFMLRRTKSRLIETGTLSLPPLTEITLMAPLVTMQK 467
            G   SG+    VK++F++LKYILGAFMLRR KS+LIE GTL LPPLTEIT+MAPLV++QK
Sbjct: 243  GHPSSGEKVAEVKDQFRTLKYILGAFMLRRMKSKLIECGTLVLPPLTEITVMAPLVSLQK 302

Query: 466  RVYTSILRKELPKLLALSSGTSNQQSLQNIVIQLRKACSHPYLFAGIEPEPYEEGEHLVQ 287
            +VY SILRKELPKLLA SSG S  QSLQNIVIQLRKACSHPYLF GIEPEPYEEGEHLVQ
Sbjct: 303  KVYMSILRKELPKLLAFSSGPSGHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQ 362

Query: 286  ASGKLIVLDQLLQKLHNSGHRVLLFAQMTHTLDVLQDYMELRKYPYERLDGSIRAEERFA 107
            ASGKLI+LDQLLQKL+NSGHRVLLFAQMTHTLD+LQD+MELRKY YERLDGS+RAEERF+
Sbjct: 363  ASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDILQDFMELRKYSYERLDGSVRAEERFS 422

Query: 106  AIRSFSRQSVVGDSNSEADHDSAFVFMISTRAGGV 2
            AIRSFSRQ V G  NS+    SAFVFMISTRAGGV
Sbjct: 423  AIRSFSRQIVEGSLNSQDVQSSAFVFMISTRAGGV 457


>emb|CBI16626.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  620 bits (1599), Expect = e-175
 Identities = 313/394 (79%), Positives = 349/394 (88%)
 Frame = -2

Query: 1183 MGLGKTLQAISFLSYLKFCRGLHGPFLILCPLSVTDGWVSEITKFAPKLKVLRYVGDKQY 1004
            MGLGKTLQAISFLSY+K  +   GPFL+LCPLSVTDGWVSEI  FAPKL+VLRYVGDK++
Sbjct: 63   MGLGKTLQAISFLSYMKVHQKSPGPFLVLCPLSVTDGWVSEIANFAPKLRVLRYVGDKEH 122

Query: 1003 RRALRREMYGSVEKQSSSSNVPALPFDVLLTTYDIALIDQDFLSQIPWHYAVIDEAQRLK 824
            RR+LRR +Y  V++Q S S+V ALPFD+LLTTYDIAL+DQ FLSQIPWHYA+IDEAQRLK
Sbjct: 123  RRSLRRTIYEQVKEQCSKSDVSALPFDLLLTTYDIALMDQHFLSQIPWHYAIIDEAQRLK 182

Query: 823  NPSSVLYNVLRERYIMPRRLLMTGTPIQNSLNELWALLQFSMASIFGTLEQFCSTFKEGG 644
            NPSSVLYNVL+ER++MPRRLLMTGTPIQN+L ELWAL+ F M SIFGTLEQF STFKE G
Sbjct: 183  NPSSVLYNVLKERFVMPRRLLMTGTPIQNNLTELWALMHFCMPSIFGTLEQFLSTFKEDG 242

Query: 643  DLLSGKGAPIVKEKFKSLKYILGAFMLRRTKSRLIETGTLSLPPLTEITLMAPLVTMQKR 464
               SG+    VK++F++LKYILGAFMLRR KS+LIE GTL LPPLTEIT+MAPLV++QK+
Sbjct: 243  HPSSGEKVAEVKDQFRTLKYILGAFMLRRMKSKLIECGTLVLPPLTEITVMAPLVSLQKK 302

Query: 463  VYTSILRKELPKLLALSSGTSNQQSLQNIVIQLRKACSHPYLFAGIEPEPYEEGEHLVQA 284
            VY SILRKELPKLLA SSG S  QSLQNIVIQLRKACSHPYLF GIEPEPYEEGEHLVQA
Sbjct: 303  VYMSILRKELPKLLAFSSGPSGHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQA 362

Query: 283  SGKLIVLDQLLQKLHNSGHRVLLFAQMTHTLDVLQDYMELRKYPYERLDGSIRAEERFAA 104
            SGKLI+LDQLLQKL+NSGHRVLLFAQMTHTLD+LQD+MELRKY YERLDGS+RAEERF+A
Sbjct: 363  SGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDILQDFMELRKYSYERLDGSVRAEERFSA 422

Query: 103  IRSFSRQSVVGDSNSEADHDSAFVFMISTRAGGV 2
            IRSFSRQ V G  NS+    SAFVFMISTRAGGV
Sbjct: 423  IRSFSRQIVEGSLNSQDVQSSAFVFMISTRAGGV 456


>ref|XP_002326827.1| hypothetical protein POPTRDRAFT_781297 [Populus trichocarpa]
            gi|222835142|gb|EEE73577.1| hypothetical protein
            POPTRDRAFT_781297 [Populus trichocarpa]
          Length = 485

 Score =  596 bits (1536), Expect = e-168
 Identities = 300/395 (75%), Positives = 346/395 (87%)
 Frame = -2

Query: 1186 EMGLGKTLQAISFLSYLKFCRGLHGPFLILCPLSVTDGWVSEITKFAPKLKVLRYVGDKQ 1007
            +MGLGKTLQAISFLSYLK  +   GP+L+LCPLSVTDGWVSEI KF PKLKVLRYVG+K+
Sbjct: 68   QMGLGKTLQAISFLSYLKVHQKSPGPYLVLCPLSVTDGWVSEIDKFTPKLKVLRYVGEKE 127

Query: 1006 YRRALRREMYGSVEKQSSSSNVPALPFDVLLTTYDIALIDQDFLSQIPWHYAVIDEAQRL 827
            ++R+LR+ ++  V++  SSSNV  LPFDVLLTTYDIAL+DQ+FLSQIPWHYA++DEAQRL
Sbjct: 128  HQRSLRKTIHEHVKESPSSSNVSLLPFDVLLTTYDIALVDQEFLSQIPWHYAIVDEAQRL 187

Query: 826  KNPSSVLYNVLRERYIMPRRLLMTGTPIQNSLNELWALLQFSMASIFGTLEQFCSTFKEG 647
            KNP SVLYNVL ++++MPRRLLMTGTPIQN+L ELWAL+ F M  +FGTL+QF STF+E 
Sbjct: 188  KNPKSVLYNVLIDQFLMPRRLLMTGTPIQNNLTELWALMHFCMPLVFGTLDQFLSTFREA 247

Query: 646  GDLLSGKGAPIVKEKFKSLKYILGAFMLRRTKSRLIETGTLSLPPLTEITLMAPLVTMQK 467
             D  S   A  VK +FK+LK IL +FMLRRTKSRLIE G L LP LTEIT+MAPLV++QK
Sbjct: 248  ADASSDHDATKVKRQFKTLKSILKSFMLRRTKSRLIECGNLVLPSLTEITVMAPLVSLQK 307

Query: 466  RVYTSILRKELPKLLALSSGTSNQQSLQNIVIQLRKACSHPYLFAGIEPEPYEEGEHLVQ 287
            +VYTSILRKELPKLLALSS  SN QSLQN+VIQLRKACSHPYLF GIEPEPYEEGEHLV+
Sbjct: 308  KVYTSILRKELPKLLALSSSASNHQSLQNMVIQLRKACSHPYLFPGIEPEPYEEGEHLVK 367

Query: 286  ASGKLIVLDQLLQKLHNSGHRVLLFAQMTHTLDVLQDYMELRKYPYERLDGSIRAEERFA 107
            ASGKLI+LDQLL+KLH+SGHRVLLFAQMTHTLD+LQD++ELRKY YERLDGS+RAEERFA
Sbjct: 368  ASGKLIILDQLLEKLHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSVRAEERFA 427

Query: 106  AIRSFSRQSVVGDSNSEADHDSAFVFMISTRAGGV 2
            AIRSFS QS  G S SE+D +S+FVFMISTRAGGV
Sbjct: 428  AIRSFSGQS--GRSGSESDQNSSFVFMISTRAGGV 460


>ref|XP_002511628.1| helicase, putative [Ricinus communis] gi|223548808|gb|EEF50297.1|
            helicase, putative [Ricinus communis]
          Length = 860

 Score =  583 bits (1503), Expect = e-164
 Identities = 296/395 (74%), Positives = 335/395 (84%)
 Frame = -2

Query: 1186 EMGLGKTLQAISFLSYLKFCRGLHGPFLILCPLSVTDGWVSEITKFAPKLKVLRYVGDKQ 1007
            EMGLGKTLQA+ FLSYLK  +   GPFL+LCPLSVTDGW+SE+ KF PKLK LRYVGDK 
Sbjct: 63   EMGLGKTLQAVCFLSYLKAQQISAGPFLVLCPLSVTDGWISEMAKFTPKLKALRYVGDKD 122

Query: 1006 YRRALRREMYGSVEKQSSSSNVPALPFDVLLTTYDIALIDQDFLSQIPWHYAVIDEAQRL 827
            +RR LRR MY  V+   SS++   LPFDVLLTTYDIAL+DQ+FLSQIPWHYA+IDEAQRL
Sbjct: 123  HRRNLRRNMYQHVKNHPSSTDGSLLPFDVLLTTYDIALMDQNFLSQIPWHYAIIDEAQRL 182

Query: 826  KNPSSVLYNVLRERYIMPRRLLMTGTPIQNSLNELWALLQFSMASIFGTLEQFCSTFKEG 647
            KNPSSVLYNVL ER++MPRRLLMTGTP+QN+L ELW L+ F M S+FGTLEQF STFKE 
Sbjct: 183  KNPSSVLYNVLNERFLMPRRLLMTGTPMQNNLIELWVLMHFCMPSVFGTLEQFLSTFKEA 242

Query: 646  GDLLSGKGAPIVKEKFKSLKYILGAFMLRRTKSRLIETGTLSLPPLTEITLMAPLVTMQK 467
            GD  S   A  +K++ K+LK +L AFM+RRTKS+LIE G L LPPLTE+T+MAPLV++QK
Sbjct: 243  GDPTSDLDAAKIKKQLKTLKCMLTAFMIRRTKSKLIEAGDLVLPPLTEVTVMAPLVSLQK 302

Query: 466  RVYTSILRKELPKLLALSSGTSNQQSLQNIVIQLRKACSHPYLFAGIEPEPYEEGEHLVQ 287
            RVY SILRKELPKLLALSS  SN QSLQNIVIQLRKACSHPYLF GIEPEPYEEGEHLVQ
Sbjct: 303  RVYMSILRKELPKLLALSSAASNHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHLVQ 362

Query: 286  ASGKLIVLDQLLQKLHNSGHRVLLFAQMTHTLDVLQDYMELRKYPYERLDGSIRAEERFA 107
            ASGKLI+LDQLL+KLH SGHRV++FAQMTHTLD+LQD++ELRKY YERLDGSIRAEERFA
Sbjct: 363  ASGKLIILDQLLKKLHGSGHRVIIFAQMTHTLDILQDFLELRKYSYERLDGSIRAEERFA 422

Query: 106  AIRSFSRQSVVGDSNSEADHDSAFVFMISTRAGGV 2
            AIRSFS Q++           +AFVFMISTRAGGV
Sbjct: 423  AIRSFSGQAM-----------NAFVFMISTRAGGV 446


>ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222835143|gb|EEE73578.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 866

 Score =  581 bits (1497), Expect = e-163
 Identities = 295/395 (74%), Positives = 340/395 (86%)
 Frame = -2

Query: 1186 EMGLGKTLQAISFLSYLKFCRGLHGPFLILCPLSVTDGWVSEITKFAPKLKVLRYVGDKQ 1007
            +MGLGKTLQAISFLSYLK  +   GP+L+LCPLSVTDGWVSEI KF PKLKVLRYVG+K+
Sbjct: 68   QMGLGKTLQAISFLSYLKVHQKSPGPYLVLCPLSVTDGWVSEIDKFTPKLKVLRYVGEKE 127

Query: 1006 YRRALRREMYGSVEKQSSSSNVPALPFDVLLTTYDIALIDQDFLSQIPWHYAVIDEAQRL 827
            ++R+LR+ ++          +V  LPFDVLLTTYDIAL+DQ+FLSQIPWHYA++DEAQRL
Sbjct: 128  HQRSLRKTIH---------EHVSLLPFDVLLTTYDIALVDQEFLSQIPWHYAIVDEAQRL 178

Query: 826  KNPSSVLYNVLRERYIMPRRLLMTGTPIQNSLNELWALLQFSMASIFGTLEQFCSTFKEG 647
            KNP SVLYNVL ++++MPRRLLMTGTPIQN+L ELWAL+ F M  +FGTL+QF STF+E 
Sbjct: 179  KNPKSVLYNVLIDQFLMPRRLLMTGTPIQNNLTELWALMHFCMPLVFGTLDQFLSTFREA 238

Query: 646  GDLLSGKGAPIVKEKFKSLKYILGAFMLRRTKSRLIETGTLSLPPLTEITLMAPLVTMQK 467
             D  S   A  VK +FK+LK IL +FMLRRTKSRLIE G L LP LTEIT+MAPLV++QK
Sbjct: 239  ADASSDHDATKVKRQFKTLKSILKSFMLRRTKSRLIECGNLVLPSLTEITVMAPLVSLQK 298

Query: 466  RVYTSILRKELPKLLALSSGTSNQQSLQNIVIQLRKACSHPYLFAGIEPEPYEEGEHLVQ 287
            +VYTSILRKELPKLLALSS  SN QSLQN+VIQLRKACSHPYLF GIEPEPYEEGEHLV+
Sbjct: 299  KVYTSILRKELPKLLALSSSASNHQSLQNMVIQLRKACSHPYLFPGIEPEPYEEGEHLVK 358

Query: 286  ASGKLIVLDQLLQKLHNSGHRVLLFAQMTHTLDVLQDYMELRKYPYERLDGSIRAEERFA 107
            ASGKLI+LDQLL+KLH+SGHRVLLFAQMTHTLD+LQD++ELRKY YERLDGS+RAEERFA
Sbjct: 359  ASGKLIILDQLLEKLHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSVRAEERFA 418

Query: 106  AIRSFSRQSVVGDSNSEADHDSAFVFMISTRAGGV 2
            AIRSFS QS  G S SE+D +S+FVFMISTRAGGV
Sbjct: 419  AIRSFSGQS--GRSGSESDQNSSFVFMISTRAGGV 451


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