BLASTX nr result

ID: Atractylodes21_contig00035335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035335
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    77   2e-19
gb|ABB00038.1| reverse transcriptase family member [Glycine max]       65   5e-19
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          65   5e-16
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    65   2e-15
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...    51   1e-11

>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score = 77.0 bits (188), Expect(2) = 2e-19
 Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
 Frame = -3

Query: 495 LTNNQFGIMPGRSMTQFTYLYI-LWRNITCVVKICK*CT*IWRKAYDSVLNNLIWRILEG 319
           +++NQFG MPGRS  +  YL   L        K          KAYD V  ++IWRILE 
Sbjct: 268 VSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDLEKAYDRVSRDIIWRILEK 327

Query: 318 RGVPQRYVRGI---HVQARTCVRTPIGEMRYFLLKIGLQEGSTFSLFIFTVILDEISHKN 148
           +GV   Y++ I   +  A+T VRT  G+   F + +GL +GS+ S ++F +++DE++   
Sbjct: 328 KGVRVAYIQAIKDMYEGAKTAVRTYEGQTESFPITVGLHQGSSLSPYLFALVMDELTGHI 387

Query: 147 HGRVPLCML 121
              +P CML
Sbjct: 388 QDDIPWCML 396



 Score = 44.3 bits (103), Expect(2) = 2e-19
 Identities = 20/37 (54%), Positives = 29/37 (78%)
 Frame = -1

Query: 113 LVTETNDELNARLDQWVEVL*TQGLRISRSKTEYLWC 3
           L+ ET + +NA+L+ W EVL ++GL +SRSKTEY+ C
Sbjct: 403 LIDETQEGVNAKLNLWREVLESKGLCLSRSKTEYMEC 439


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 65.5 bits (158), Expect(3) = 5e-19
 Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
 Frame = -3

Query: 369 KAYDSVLNNLIWRILEGRGVPQRYVRGI---HVQARTCVRTPIGEMRYFLLKIGLQEGST 199
           KAYD V   ++W+ LE +GV   Y+R I   + +  T VRT  GE   F + IGL +GST
Sbjct: 36  KAYDRVPREILWKALEKKGVRVAYIRAIQDMYDRVSTSVRTQGGESDDFPITIGLHQGST 95

Query: 198 FSLFIFTVILDEISHKNHGRVPLCML 121
            S ++FT+ILD ++ +     P CML
Sbjct: 96  LSPYLFTLILDVLTEQIQEIAPRCML 121



 Score = 43.1 bits (100), Expect(3) = 5e-19
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -1

Query: 113 LVTETNDELNARLDQWVEVL*TQGLRISRSKTEYLWC 3
           L+ E+ +ELN RL+ W   L T G R+SRSK+EY+ C
Sbjct: 128 LLGESREELNERLETWRRALETHGFRLSRSKSEYMEC 164



 Score = 30.8 bits (68), Expect(3) = 5e-19
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = -2

Query: 466 RQIDDTIHLLIYLVEKYYMCSKNLQIVYIDLEK 368
           R   + I+LL  ++E+Y M  ++L +++IDLEK
Sbjct: 4   RSTMEAIYLLRRVMEQYRMAQQDLHLIFIDLEK 36


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 65.5 bits (158), Expect(2) = 5e-16
 Identities = 44/131 (33%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
 Frame = -3

Query: 495 LTNNQFGIMPGRSMTQFTYLYILWRNITCVVKICK*CT*IW---RKAYDSVLNNLIWRIL 325
           +T NQFG M GRS+T+   +Y+L R +       +    ++    KAYD V   ++W++L
Sbjct: 158 VTENQFGFMSGRSITEA--IYLLRRMMERYRSNKRDLHMVFIDLEKAYDRVPREVLWKVL 215

Query: 324 EGRGVPQRYVRGI---HVQARTCVRTPIGEMRYFLLKIGLQEGSTFSLFIFTVILDEISH 154
           E   V   Y+R I   +  A T V+T  G    F + IGL +GS+ S ++FT++L+ ++ 
Sbjct: 216 EKMRVRIAYIRAIKDMYDGATTSVKTQGGVTEEFPIGIGLHQGSSLSPYLFTIVLEVLTE 275

Query: 153 KNHGRVPLCML 121
                VP C+L
Sbjct: 276 HIQEPVPWCIL 286



 Score = 43.9 bits (102), Expect(2) = 5e-16
 Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
 Frame = -1

Query: 131 CVCYS---TLVTETNDELNARLDQWVEVL*TQGLRISRSKTEYLWC 3
           C+ ++    L+ E  ++LN +L+ W E L   GLRISRSKTEY+ C
Sbjct: 284 CILFADDIVLMGELREDLNKKLELWKEALEVYGLRISRSKTEYMEC 329


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 65.5 bits (158), Expect(2) = 2e-15
 Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 6/132 (4%)
 Frame = -3

Query: 498 MLTNNQFGIMPGRSMTQFTYLYILWRNITCVVKICK*CT*IW---RKAYDSVLNNLIWRI 328
           ++T+NQFG M GRS  +   +Y+L R +       K    ++    K YD V   ++W+ 
Sbjct: 245 LVTDNQFGFMLGRSTMEA--IYLLQRVMERYRTDKKDLHLVFFDLEKGYDRVPREILWKA 302

Query: 327 LEGRGVPQRYVRGI---HVQARTCVRTPIGEMRYFLLKIGLQEGSTFSLFIFTVILDEIS 157
           LE + V   Y+R I   + +A T V+T  G    F + IGL +GST + ++FT++LD ++
Sbjct: 303 LEKKRVRIAYIRAIKDMYERASTSVKTQDGTTEDFPITIGLHQGSTLTPYLFTLVLDVLT 362

Query: 156 HKNHGRVPLCML 121
                  P CML
Sbjct: 363 EHIQELAPRCML 374



 Score = 42.0 bits (97), Expect(2) = 2e-15
 Identities = 18/37 (48%), Positives = 26/37 (70%)
 Frame = -1

Query: 113 LVTETNDELNARLDQWVEVL*TQGLRISRSKTEYLWC 3
           LV E+ +E+N RL+ W + L   G R+SRSKT+Y+ C
Sbjct: 381 LVGESREEVNGRLETWRQALEAYGFRLSRSKTKYMEC 417


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score = 50.8 bits (120), Expect(2) = 1e-11
 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
 Frame = -3

Query: 339  IWRILEGRGVPQRYVRGI---HVQARTCVRTPIGEMRYFLLKIGLQEGSTFSLFIFTVIL 169
            +W++LE R V   Y+R I   +  A T V+T  G    F + IGL +GS+ S ++FT++L
Sbjct: 1069 LWKVLEKRRVRIAYIRAIKDMYEGATTSVKTQGGVTEEFPIGIGLHQGSSLSPYLFTLVL 1128

Query: 168  DEISHKNHGRVPLCML 121
            + ++      VP CML
Sbjct: 1129 EVLTEHIQEPVPWCML 1144



 Score = 43.9 bits (102), Expect(2) = 1e-11
 Identities = 20/37 (54%), Positives = 27/37 (72%)
 Frame = -1

Query: 113  LVTETNDELNARLDQWVEVL*TQGLRISRSKTEYLWC 3
            L+ E+ ++LN +L+ W E L   GLRISRSKTEY+ C
Sbjct: 1151 LMGESREDLNKKLELWREALEVYGLRISRSKTEYMEC 1187


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