BLASTX nr result

ID: Atractylodes21_contig00035328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035328
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    90   2e-16
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    90   2e-16
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    85   7e-15
ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213...    77   2e-12
gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp...    77   2e-12

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 37/66 (56%), Positives = 49/66 (74%)
 Frame = +1

Query: 166 RRLEMPTFDGTDPDGWILRAKRYRTLNRLSNEEKLEVAVIAFEGDALRWYQWEHKRCEIT 345
           ++L+MP FD TDPDGWILR +R+     L++ EK+E AV+A EGDALRWYQWE+KR    
Sbjct: 175 KKLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVAMEGDALRWYQWENKRRPFR 234

Query: 346 RWDELK 363
            W+ +K
Sbjct: 235 NWESMK 240


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 38/68 (55%), Positives = 51/68 (75%)
 Frame = +1

Query: 160 KGRRLEMPTFDGTDPDGWILRAKRYRTLNRLSNEEKLEVAVIAFEGDALRWYQWEHKRCE 339
           K +RL++P F GT+PDGWILR +RY    RL+ EE+LE AV+A +G+AL W+QWEH+   
Sbjct: 78  KAKRLDLPIFTGTNPDGWILRTERYFGFYRLAAEEQLEAAVVALDGEALLWFQWEHRHRP 137

Query: 340 ITRWDELK 363
           IT W E+K
Sbjct: 138 ITGWPEMK 145


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 32/68 (47%), Positives = 52/68 (76%)
 Frame = +1

Query: 160 KGRRLEMPTFDGTDPDGWILRAKRYRTLNRLSNEEKLEVAVIAFEGDALRWYQWEHKRCE 339
           + ++L++P F G +PDGWI+RA+R+    RL+ +EK+E AV++ +G+AL WYQWE++R  
Sbjct: 98  RAKKLDLPVFSGNNPDGWIIRAERFFQFYRLTEDEKVEAAVVSLDGEALLWYQWENRRRP 157

Query: 340 ITRWDELK 363
           I RW E++
Sbjct: 158 IHRWSEMR 165


>ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213561, partial [Cucumis
           sativus]
          Length = 764

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 33/69 (47%), Positives = 49/69 (71%)
 Frame = +1

Query: 160 KGRRLEMPTFDGTDPDGWILRAKRYRTLNRLSNEEKLEVAVIAFEGDALRWYQWEHKRCE 339
           K +++EMP F+G DPD W+ RA RY  +++LS+ EK+ VA I+FEG AL WY+ + +R +
Sbjct: 110 KFKKVEMPVFNGEDPDSWLFRADRYFQIHKLSDAEKVLVATISFEGPALNWYRAQEERDK 169

Query: 340 ITRWDELKK 366
            T W  LK+
Sbjct: 170 FTGWHNLKE 178


>gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp. melo]
          Length = 473

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 30/70 (42%), Positives = 48/70 (68%)
 Frame = +1

Query: 157 VKGRRLEMPTFDGTDPDGWILRAKRYRTLNRLSNEEKLEVAVIAFEGDALRWYQWEHKRC 336
           +K ++LEMP F+G DPDGWI +A+ Y  ++ L+ +EKL++A+++ EG  L W++W   R 
Sbjct: 94  IKFKKLEMPVFNGEDPDGWIYKAEYYFQMHLLNEQEKLKIAIVSMEGKGLCWFRWAENRK 153

Query: 337 EITRWDELKK 366
               W ELK+
Sbjct: 154 RFRSWKELKE 163


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