BLASTX nr result

ID: Atractylodes21_contig00035294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035294
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated...    87   2e-15
ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated...    77   1e-12
ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated...    75   4e-12
ref|XP_002518458.1| hepatocellular carcinoma-associated antigen,...    70   2e-10

>ref|XP_002272817.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Vitis vinifera] gi|302144122|emb|CBI23227.3| unnamed
           protein product [Vitis vinifera]
          Length = 652

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/80 (51%), Positives = 56/80 (70%)
 Frame = -1

Query: 242 LFNAIQVYDEALKIVPSCTMLDLYIKFLMDTIDRNGHNQSSRLSDSPNNYIDPVSYVLMV 63
           L  A+QVY+EALK +PS  M +LY KFLMD I      ++S    +  + +  +S++LMV
Sbjct: 346 LQKAVQVYEEALKFLPSAVMFNLYTKFLMDAIVSREKTKNSEPFSTSEHTVGSLSHLLMV 405

Query: 62  YEKAQSMGCITEDFACQHVS 3
           YEKA++MGC+TED ACQHVS
Sbjct: 406 YEKAENMGCLTEDLACQHVS 425


>ref|XP_002310740.1| predicted protein [Populus trichocarpa] gi|222853643|gb|EEE91190.1|
           predicted protein [Populus trichocarpa]
          Length = 643

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 42/78 (53%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
 Frame = -1

Query: 233 AIQVYDEALKIVPSCTMLDLYIKFLMDTI-DRNGHNQSSRLSDSPNNYIDPVSYVLMVYE 57
           AIQVY+EAL+ +PS  M +LYIKFLMD I  + G N  S++S    +YI   S++L+VYE
Sbjct: 341 AIQVYEEALQFLPSPMMFNLYIKFLMDAIAPKGGENDPSKVSSPTEDYI---SHLLVVYE 397

Query: 56  KAQSMGCITEDFACQHVS 3
           KA  +G +TED ACQ+VS
Sbjct: 398 KADVVGYMTEDLACQYVS 415


>ref|XP_003549767.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 649

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = -1

Query: 233 AIQVYDEALKIVPSCTMLDLYIKFLMDTI-DRNGHNQSSRLSDSPNNYIDPVSYVLMVYE 57
           A+QVY+EALK VPS TM  LY  FL D I  + G    +  S    NYI   S++L +YE
Sbjct: 348 AVQVYEEALKNVPSGTMFSLYANFLTDIIAPKEGETDINGSSGCAVNYI---SHLLSIYE 404

Query: 56  KAQSMGCITEDFACQHVS 3
           +A+SMGCITED AC+HVS
Sbjct: 405 RAESMGCITEDLACKHVS 422


>ref|XP_003529637.1| PREDICTED: U3 small nucleolar RNA-associated protein 6 homolog
           [Glycine max]
          Length = 655

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/78 (51%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
 Frame = -1

Query: 233 AIQVYDEALKIVPSCTMLDLYIKFLMDTI-DRNGHNQSSRLSDSPNNYIDPVSYVLMVYE 57
           A+QVY+EAL+ VPS TM  LY  FL D +  + G    +  S    NYI   S++L++YE
Sbjct: 355 AVQVYEEALENVPSGTMFCLYANFLTDIVAHKEGETNINGSSGHAANYI---SHLLLIYE 411

Query: 56  KAQSMGCITEDFACQHVS 3
           +A+SMGCITED AC+HVS
Sbjct: 412 RAESMGCITEDLACKHVS 429


>ref|XP_002518458.1| hepatocellular carcinoma-associated antigen, putative [Ricinus
           communis] gi|223542303|gb|EEF43845.1| hepatocellular
           carcinoma-associated antigen, putative [Ricinus
           communis]
          Length = 652

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/80 (45%), Positives = 54/80 (67%)
 Frame = -1

Query: 242 LFNAIQVYDEALKIVPSCTMLDLYIKFLMDTIDRNGHNQSSRLSDSPNNYIDPVSYVLMV 63
           L  A+QVY+EAL+ V S TM  LY KFLMD I      + ++LS   ++    +S++L +
Sbjct: 347 LQKAVQVYEEALQFVSSPTMFSLYAKFLMDVIAPK--REDNQLSGPASHTKHQLSHLLTI 404

Query: 62  YEKAQSMGCITEDFACQHVS 3
           ++KA+  GCI+EDFAC++VS
Sbjct: 405 FKKAEISGCISEDFACEYVS 424


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