BLASTX nr result

ID: Atractylodes21_contig00035281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035281
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266763.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...    82   6e-14
ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002514971.1| conserved hypothetical protein [Ricinus comm...    69   5e-10
emb|CBI40086.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinif...    66   3e-09

>ref|XP_002266763.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 458

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 50/129 (38%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
 Frame = +1

Query: 4   NFIWNSAMRFQSFPSNFMCHDKVGAACVVDQHTKAGELGGVGKGVVNPAHN--------T 159
           NFIWN+AMRFQ+ P      DK   AC     T+  E       V +P++N         
Sbjct: 109 NFIWNNAMRFQALPGKAWLDDKSDIACGFGGFTEEKE-------VADPSYNCRFGPICVV 161

Query: 160 EDIMGFNCGSASDLVTKREEFLNGFATCPDVVGGEPHEAFFLALSYLGTRDLLVVERVCR 339
           ED++     +      + EEF     +C D  G  PH A   AL YLG RDLL VERVCR
Sbjct: 162 EDVLSSGNENVCGASCQAEEFREFNGSCYDGDGAAPHAAVSFALGYLGLRDLLSVERVCR 221

Query: 340 SLCSTIRND 366
           SL +T+++D
Sbjct: 222 SLRATVQSD 230


>ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|222864676|gb|EEF01807.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 53/138 (38%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
 Frame = +1

Query: 4   NFIWNSAMRFQSFPSN--FMCHDKVGAACVVDQHTKAGELGGVGKGVVNPAHNTEDIMGF 177
           NFI N+AM FQ FP N  F   + VG     D+ ++A E+G       N  H  ++  G 
Sbjct: 105 NFICNNAMWFQQFPGNMGFDLSNVVGG--YGDERSEANEVG-------NAPH--QEAPGS 153

Query: 178 NCGSASDLVTKRE---------------EFLNGFATCPDVVGGEPHEAFFLALSYLGTRD 312
           +C     L    E               EF NG   C +     PH AF  AL YLG RD
Sbjct: 154 DCDMEDVLSPGNEIIDNETVGVVDESSGEFQNGHLVCSEGDKEAPHAAFAFALGYLGVRD 213

Query: 313 LLVVERVCRSLCSTIRND 366
           LLVVE VCRSL ST+++D
Sbjct: 214 LLVVETVCRSLRSTVQSD 231


>ref|XP_002514971.1| conserved hypothetical protein [Ricinus communis]
           gi|223546022|gb|EEF47525.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 483

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 49/127 (38%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
 Frame = +1

Query: 4   NFIWNSAMRFQSFPSNFMCHDKVGAA------CVVDQHTKAGELGGVGKGVVNPAHNTED 165
           NFIW++AMRFQ+FP +     +  AA      C+  + T A   G    GV     N   
Sbjct: 116 NFIWSNAMRFQNFPGSMRFDCRSNAAGGFCDGCLELEGTCAS--GPCAFGVTCNLENIFS 173

Query: 166 IMGFNCGSASDLVTKREEFLNGFATCPDVVGGEPHEAFFLALSYLGTRDLLVVERVCRSL 345
           +     G+    + +R E  +  ++  DV  G PH A   AL++LG RDLLVVE VCRSL
Sbjct: 174 LGNELVGNKDVGIMERSEESHEVSSDGDV--GAPHSALGFALAFLGVRDLLVVETVCRSL 231

Query: 346 CSTIRND 366
             T+RND
Sbjct: 232 RWTVRND 238


>emb|CBI40086.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/121 (33%), Positives = 58/121 (47%)
 Frame = +1

Query: 4   NFIWNSAMRFQSFPSNFMCHDKVGAACVVDQHTKAGELGGVGKGVVNPAHNTEDIMGFNC 183
           N +W+ AMRFQ   SN             ++     E  G+            + + F+ 
Sbjct: 125 NLVWSGAMRFQPEFSN------------AEKSVPCNEFDGLLMDKDLCDGGFSEFLSFSR 172

Query: 184 GSASDLVTKREEFLNGFATCPDVVGGEPHEAFFLALSYLGTRDLLVVERVCRSLCSTIRN 363
                   + +EF       PD   GEPH+A F +L+YLG +DLLVVERVCRSLC+ +R+
Sbjct: 173 HGNRINGNQEKEFQACTKVHPDDETGEPHDALFFSLAYLGVQDLLVVERVCRSLCNVVRS 232

Query: 364 D 366
           D
Sbjct: 233 D 233


>ref|XP_002270874.1| PREDICTED: F-box protein SKIP14 [Vitis vinifera]
          Length = 480

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/121 (33%), Positives = 58/121 (47%)
 Frame = +1

Query: 4   NFIWNSAMRFQSFPSNFMCHDKVGAACVVDQHTKAGELGGVGKGVVNPAHNTEDIMGFNC 183
           N +W+ AMRFQ   SN             ++     E  G+            + + F+ 
Sbjct: 125 NLVWSGAMRFQPEFSN------------AEKSVPCNEFDGLLMDKDLCDGGFSEFLSFSR 172

Query: 184 GSASDLVTKREEFLNGFATCPDVVGGEPHEAFFLALSYLGTRDLLVVERVCRSLCSTIRN 363
                   + +EF       PD   GEPH+A F +L+YLG +DLLVVERVCRSLC+ +R+
Sbjct: 173 HGNRINGNQEKEFQACTKVHPDDETGEPHDALFFSLAYLGVQDLLVVERVCRSLCNVVRS 232

Query: 364 D 366
           D
Sbjct: 233 D 233


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