BLASTX nr result

ID: Atractylodes21_contig00035269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035269
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago...   171   6e-41
ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vit...   167   1e-39
emb|CAN80577.1| hypothetical protein VITISV_031734 [Vitis vinifera]   167   1e-39
ref|XP_002511787.1| DNA binding protein, putative [Ricinus commu...   166   2e-39
gb|AAF76467.1|AC020622_1 Contains similarity to excision repair ...   165   3e-39

>ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago truncatula]
           gi|124360235|gb|ABN08248.1| Helix-hairpin-helix motif,
           class 2 [Medicago truncatula]
           gi|355498862|gb|AES80065.1| Flap endonuclease GEN-like
           protein [Medicago truncatula]
          Length = 612

 Score =  171 bits (433), Expect = 6e-41
 Identities = 78/95 (82%), Positives = 85/95 (89%)
 Frame = +3

Query: 48  MGVGGNFWDILKPYARTEGFDFLRNKRIAIDLSYWIVQHETAIKLHTRNPHLRLTFFRTI 227
           MGVGGNFW++LKPY+R EGFDFLRNKR+AIDLS+WIVQH  AIK H + PHLRLTFFRTI
Sbjct: 1   MGVGGNFWELLKPYSRNEGFDFLRNKRVAIDLSFWIVQHNNAIKTHVKKPHLRLTFFRTI 60

Query: 228 NLFSKFGAFPVFVADGTPSPLKSQARIMRFLHASG 332
           NLFSKFGAFPVFV DGTPSPLKSQARI RF  +SG
Sbjct: 61  NLFSKFGAFPVFVVDGTPSPLKSQARIARFFRSSG 95


>ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vitis vinifera]
           gi|296089141|emb|CBI38844.3| unnamed protein product
           [Vitis vinifera]
          Length = 667

 Score =  167 bits (422), Expect = 1e-39
 Identities = 76/95 (80%), Positives = 85/95 (89%)
 Frame = +3

Query: 48  MGVGGNFWDILKPYARTEGFDFLRNKRIAIDLSYWIVQHETAIKLHTRNPHLRLTFFRTI 227
           MGVGG+FW++LKPYAR EGFD++RNKR+A+DLS+WIVQ ETA K + RNPHLRLTFFRTI
Sbjct: 1   MGVGGSFWELLKPYARPEGFDYIRNKRVAVDLSFWIVQQETATKANVRNPHLRLTFFRTI 60

Query: 228 NLFSKFGAFPVFVADGTPSPLKSQARIMRFLHASG 332
           NLFSKFGAFPVFV DGTPSPLKSQARI RF   SG
Sbjct: 61  NLFSKFGAFPVFVVDGTPSPLKSQARIARFFRGSG 95


>emb|CAN80577.1| hypothetical protein VITISV_031734 [Vitis vinifera]
          Length = 239

 Score =  167 bits (422), Expect = 1e-39
 Identities = 76/95 (80%), Positives = 85/95 (89%)
 Frame = +3

Query: 48  MGVGGNFWDILKPYARTEGFDFLRNKRIAIDLSYWIVQHETAIKLHTRNPHLRLTFFRTI 227
           MGVGG+FW++LKPYAR EGFD++RNKR+A+DLS+WIVQ ETA K + RNPHLRLTFFRTI
Sbjct: 1   MGVGGSFWELLKPYARPEGFDYIRNKRVAVDLSFWIVQQETATKANVRNPHLRLTFFRTI 60

Query: 228 NLFSKFGAFPVFVADGTPSPLKSQARIMRFLHASG 332
           NLFSKFGAFPVFV DGTPSPLKSQARI RF   SG
Sbjct: 61  NLFSKFGAFPVFVVDGTPSPLKSQARIARFFRGSG 95


>ref|XP_002511787.1| DNA binding protein, putative [Ricinus communis]
           gi|223548967|gb|EEF50456.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 609

 Score =  166 bits (420), Expect = 2e-39
 Identities = 79/95 (83%), Positives = 83/95 (87%)
 Frame = +3

Query: 48  MGVGGNFWDILKPYARTEGFDFLRNKRIAIDLSYWIVQHETAIKLHTRNPHLRLTFFRTI 227
           MGVGG FWDILKPY R EG DFLR KR+AIDLSYWIVQHETAIK + R PHLRLTFFRTI
Sbjct: 1   MGVGGKFWDILKPYTRHEGPDFLREKRVAIDLSYWIVQHETAIKSYARKPHLRLTFFRTI 60

Query: 228 NLFSKFGAFPVFVADGTPSPLKSQARIMRFLHASG 332
           NLFSKFGAFPVFV DGTPSPLKS+ARI RF  +SG
Sbjct: 61  NLFSKFGAFPVFVVDGTPSPLKSRARISRFFRSSG 95


>gb|AAF76467.1|AC020622_1 Contains similarity to excision repair protein ERCC5 from Homo
           sapiens gi|1082359 and contains XPG N-terminal PF|00752
           and XPG I-region PF|00867 domains [Arabidopsis thaliana]
          Length = 497

 Score =  165 bits (418), Expect = 3e-39
 Identities = 75/95 (78%), Positives = 85/95 (89%)
 Frame = +3

Query: 48  MGVGGNFWDILKPYARTEGFDFLRNKRIAIDLSYWIVQHETAIKLHTRNPHLRLTFFRTI 227
           MGVGGNFWD+L+PYA+ +GFDFLRNKR+A+DLS+WIVQHETA+K     PHLRLTFFRTI
Sbjct: 1   MGVGGNFWDLLRPYAQQQGFDFLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTI 60

Query: 228 NLFSKFGAFPVFVADGTPSPLKSQARIMRFLHASG 332
           NLFSKFGA+PVFV DGTPSPLKSQARI RF  +SG
Sbjct: 61  NLFSKFGAYPVFVVDGTPSPLKSQARISRFFRSSG 95


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