BLASTX nr result

ID: Atractylodes21_contig00035259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035259
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306800.1| predicted protein [Populus trichocarpa] gi|2...   148   1e-33
ref|XP_002520949.1| conserved hypothetical protein [Ricinus comm...   147   1e-33
ref|XP_002302086.1| predicted protein [Populus trichocarpa] gi|2...   145   6e-33
gb|AAD25803.1|AC006550_11 Similar to gb|U70015 lysosomal traffic...   143   3e-32
ref|NP_171805.1| putative transport protein [Arabidopsis thalian...   143   3e-32

>ref|XP_002306800.1| predicted protein [Populus trichocarpa] gi|222856249|gb|EEE93796.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score =  148 bits (373), Expect = 1e-33
 Identities = 70/107 (65%), Positives = 85/107 (79%)
 Frame = -1

Query: 643 SDWLETNWYISGHQSGAIKVWQMVHNSSDMVQAQKHPSAHLQCGLGLGSKSPEYTLLLHK 464
           SDWL+TNWY++GHQSGA+KVW MVH  S+   A    +++L  GL LG K PEY LLLHK
Sbjct: 498 SDWLDTNWYVTGHQSGAVKVWHMVH-CSNQESALSKSTSNLTGGLNLGDKVPEYRLLLHK 556

Query: 463 VLKGHKNPVTALHISSDLKLLLSGDAGGHLLAWTLPDETLRNSVKRG 323
           VLK HK+PVT+LH++SDLK LLSGD+GGHLL+WTLPDE+L  S  RG
Sbjct: 557 VLKFHKHPVTSLHLTSDLKQLLSGDSGGHLLSWTLPDESLLTSSNRG 603


>ref|XP_002520949.1| conserved hypothetical protein [Ricinus communis]
            gi|223539786|gb|EEF41366.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 3591

 Score =  147 bits (372), Expect = 1e-33
 Identities = 69/107 (64%), Positives = 83/107 (77%)
 Frame = -1

Query: 643  SDWLETNWYISGHQSGAIKVWQMVHNSSDMVQAQKHPSAHLQCGLGLGSKSPEYTLLLHK 464
            SDW + NWY++GHQSGA+KVWQMVH  S+   A    S +   GL LG K PEY L+LH+
Sbjct: 3486 SDWQDANWYVTGHQSGAVKVWQMVH-CSNQESALSKSSGNPTAGLNLGDKLPEYRLILHR 3544

Query: 463  VLKGHKNPVTALHISSDLKLLLSGDAGGHLLAWTLPDETLRNSVKRG 323
            VLK HK+PVTALH++SDLK LLSGD+GGHLL+WTLPDETLR S  +G
Sbjct: 3545 VLKSHKHPVTALHLTSDLKQLLSGDSGGHLLSWTLPDETLRASFNQG 3591


>ref|XP_002302086.1| predicted protein [Populus trichocarpa] gi|222843812|gb|EEE81359.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score =  145 bits (366), Expect = 6e-33
 Identities = 69/107 (64%), Positives = 85/107 (79%)
 Frame = -1

Query: 643 SDWLETNWYISGHQSGAIKVWQMVHNSSDMVQAQKHPSAHLQCGLGLGSKSPEYTLLLHK 464
           SDWL+TNWY++GHQSGA+KVWQMVH S+ +    K  S+    GL LG K PEY LLLHK
Sbjct: 260 SDWLDTNWYVTGHQSGAVKVWQMVHCSNQVSALSKFISSSTG-GLNLGDKVPEYRLLLHK 318

Query: 463 VLKGHKNPVTALHISSDLKLLLSGDAGGHLLAWTLPDETLRNSVKRG 323
           VLK HK+PVT+LH++SDLK LLSGD+GGHLL+WTLPD++L  S  +G
Sbjct: 319 VLKFHKHPVTSLHLTSDLKQLLSGDSGGHLLSWTLPDQSLMASSNQG 365


>gb|AAD25803.1|AC006550_11 Similar to gb|U70015 lysosomal trafficking regulator from Mus
            musculus and contains 2 PF|00400 WD40, G-beta repeats.
            ESTs gb|T43386 and gb|AA395236 come from this gene
            [Arabidopsis thaliana]
          Length = 3600

 Score =  143 bits (360), Expect = 3e-32
 Identities = 65/106 (61%), Positives = 84/106 (79%)
 Frame = -1

Query: 643  SDWLETNWYISGHQSGAIKVWQMVHNSSDMVQAQKHPSAHLQCGLGLGSKSPEYTLLLHK 464
            SDWLET+WY++GHQSGA+KVW+M+H +  +    K  S++   GL LG + PEY L+LHK
Sbjct: 3476 SDWLETSWYVTGHQSGAVKVWRMIHCTDPVSAESKTSSSNRTGGLNLGDQVPEYKLILHK 3535

Query: 463  VLKGHKNPVTALHISSDLKLLLSGDAGGHLLAWTLPDETLRNSVKR 326
            VLK HK PVTALH++SDLK LLSGD+ G LL+WT+PDETLR S+K+
Sbjct: 3536 VLKFHKQPVTALHLTSDLKQLLSGDSAGQLLSWTVPDETLRASMKQ 3581


>ref|NP_171805.1| putative transport protein [Arabidopsis thaliana]
            gi|332189402|gb|AEE27523.1| putative transport protein
            [Arabidopsis thaliana]
          Length = 3601

 Score =  143 bits (360), Expect = 3e-32
 Identities = 65/106 (61%), Positives = 84/106 (79%)
 Frame = -1

Query: 643  SDWLETNWYISGHQSGAIKVWQMVHNSSDMVQAQKHPSAHLQCGLGLGSKSPEYTLLLHK 464
            SDWLET+WY++GHQSGA+KVW+M+H +  +    K  S++   GL LG + PEY L+LHK
Sbjct: 3477 SDWLETSWYVTGHQSGAVKVWRMIHCTDPVSAESKTSSSNRTGGLNLGDQVPEYKLILHK 3536

Query: 463  VLKGHKNPVTALHISSDLKLLLSGDAGGHLLAWTLPDETLRNSVKR 326
            VLK HK PVTALH++SDLK LLSGD+ G LL+WT+PDETLR S+K+
Sbjct: 3537 VLKFHKQPVTALHLTSDLKQLLSGDSAGQLLSWTVPDETLRASMKQ 3582


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