BLASTX nr result

ID: Atractylodes21_contig00035201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035201
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280762.1| PREDICTED: DDB1- and CUL4-associated factor ...    94   9e-18
emb|CAN70290.1| hypothetical protein VITISV_019345 [Vitis vinifera]    94   9e-18
ref|XP_004168977.1| PREDICTED: DDB1- and CUL4-associated factor ...    94   1e-17
ref|XP_004144864.1| PREDICTED: DDB1- and CUL4-associated factor ...    94   1e-17
ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communi...    94   2e-17

>ref|XP_002280762.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Vitis vinifera]
          Length = 493

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/85 (61%), Positives = 61/85 (71%), Gaps = 6/85 (7%)
 Frame = +3

Query: 3   IGDENLGITGLAFSDQSELLVSYCDEFIYLFSKDMGLGSD-VNAILDSRATGFD-----S 164
           IG+  +GITGL+FSDQ ELLVSY DEFIYLF+KD+GLG D + A   S  +G D     S
Sbjct: 251 IGNPYVGITGLSFSDQRELLVSYNDEFIYLFTKDIGLGPDPIPASPASLGSGADHPLEAS 310

Query: 165 EMETDGEGGPQVYKGHRNCVTVKGV 239
            M+TD    PQVYKGH+NC TVKGV
Sbjct: 311 TMDTDDNVSPQVYKGHKNCKTVKGV 335


>emb|CAN70290.1| hypothetical protein VITISV_019345 [Vitis vinifera]
          Length = 1464

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/85 (61%), Positives = 61/85 (71%), Gaps = 6/85 (7%)
 Frame = +3

Query: 3    IGDENLGITGLAFSDQSELLVSYCDEFIYLFSKDMGLGSD-VNAILDSRATGFD-----S 164
            IG+  +GITGL+FSDQ ELLVSY DEFIYLF+KD+GLG D + A   S  +G D     S
Sbjct: 1110 IGNPYVGITGLSFSDQRELLVSYNDEFIYLFTKDIGLGPDPIPASPASLGSGADHPLEAS 1169

Query: 165  EMETDGEGGPQVYKGHRNCVTVKGV 239
             M+TD    PQVYKGH+NC TVKGV
Sbjct: 1170 TMDTDXNVSPQVYKGHKNCKTVKGV 1194


>ref|XP_004168977.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Cucumis
           sativus]
          Length = 480

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 51/81 (62%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = +3

Query: 3   IGDENLGITGLAFSDQSELLVSYCDEFIYLFSKDMGLGSDVNAILDSRATGFDSEM--ET 176
           IGDE +GITGLAFS+ SELLVSY DE IYLF++DMGLG + N +     +   SEM  E 
Sbjct: 250 IGDEQVGITGLAFSELSELLVSYNDESIYLFNRDMGLGPNPNPVPPLSLSSDASEMGAEN 309

Query: 177 DGEGGPQVYKGHRNCVTVKGV 239
              G PQVYKGHRNC TVKGV
Sbjct: 310 VDNGIPQVYKGHRNCETVKGV 330


>ref|XP_004144864.1| PREDICTED: DDB1- and CUL4-associated factor 8-like [Cucumis
           sativus]
          Length = 480

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 51/81 (62%), Positives = 58/81 (71%), Gaps = 2/81 (2%)
 Frame = +3

Query: 3   IGDENLGITGLAFSDQSELLVSYCDEFIYLFSKDMGLGSDVNAILDSRATGFDSEM--ET 176
           IGDE +GITGLAFS+ SELLVSY DE IYLF++DMGLG + N +     +   SEM  E 
Sbjct: 250 IGDEQVGITGLAFSELSELLVSYNDESIYLFNRDMGLGPNPNPVPPLSLSSDASEMGAEN 309

Query: 177 DGEGGPQVYKGHRNCVTVKGV 239
              G PQVYKGHRNC TVKGV
Sbjct: 310 VDNGIPQVYKGHRNCETVKGV 330


>ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communis]
           gi|223539508|gb|EEF41096.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 482

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/82 (58%), Positives = 61/82 (74%), Gaps = 3/82 (3%)
 Frame = +3

Query: 3   IGDENLGITGLAFSDQSELLVSYCDEFIYLFSKDMGLGSD---VNAILDSRATGFDSEME 173
           IGDE +GITGL+FSDQSELLVSY DE IYLF++DMGLG +    + +    + G  + M+
Sbjct: 249 IGDERVGITGLSFSDQSELLVSYNDELIYLFTRDMGLGPNPDPSSPVSIGSSAGELACMD 308

Query: 174 TDGEGGPQVYKGHRNCVTVKGV 239
            DG+  PQVY+GH+NC TVKGV
Sbjct: 309 VDGKVSPQVYEGHQNCETVKGV 330


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