BLASTX nr result

ID: Atractylodes21_contig00035197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035197
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277387.1| PREDICTED: putative RING-H2 finger protein A...   132   4e-29
ref|XP_004155166.1| PREDICTED: putative RING-H2 finger protein A...   125   4e-27
ref|XP_004133815.1| PREDICTED: putative RING-H2 finger protein A...   125   4e-27
ref|XP_002277411.1| PREDICTED: putative RING-H2 finger protein A...   123   1e-26
ref|XP_002320862.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_002277387.1| PREDICTED: putative RING-H2 finger protein ATL21A [Vitis vinifera]
           gi|297745433|emb|CBI40513.3| unnamed protein product
           [Vitis vinifera]
          Length = 372

 Score =  132 bits (331), Expect = 4e-29
 Identities = 69/159 (43%), Positives = 98/159 (61%), Gaps = 5/159 (3%)
 Frame = -2

Query: 466 RLFTLDLSGSPFAVSSSRNYTLLSCPVEVTMSRFPIVDCLSNSTYSTLATSSVSFATAIA 287
           RL   D++GSPF      NYT L CP E+T  RF  +DCLSNST S LATSS+S    ++
Sbjct: 98  RLLAFDITGSPFMAEYYLNYTFLICPSELTRFRFTAIDCLSNSTSSVLATSSMSL---VS 154

Query: 286 NRTACRIISSLRYPAS-RYQDQQVLSSDLNMDISLTWDNPNCRDCAAGGGTCGYTNTTMQ 110
             ++C+I+++L  P S   Q+++  SSDLN D+ LTWD P+C DC A GG+CG+ N++  
Sbjct: 155 KMSSCQILTTLAVPVSWPVQNEEDFSSDLNSDLQLTWDVPSCGDCQAQGGSCGFQNSSSL 214

Query: 109 EIACFD--NTEKGHNK--AMIAMIIVSVGIALPAIAACI 5
           E+ CF    T+ G     ++    I+S+ I LPAI   +
Sbjct: 215 EVGCFSTPGTDNGSESSGSLRVFRIISLSITLPAIICAV 253


>ref|XP_004155166.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis
           sativus]
          Length = 382

 Score =  125 bits (314), Expect = 4e-27
 Identities = 65/146 (44%), Positives = 86/146 (58%)
 Frame = -2

Query: 454 LDLSGSPFAVSSSRNYTLLSCPVEVTMSRFPIVDCLSNSTYSTLATSSVSFATAIANRTA 275
           ++ S SPF    S+N T LSCP   TMS FPI+DCLSNST S LATSS SF  +++  T+
Sbjct: 107 INFSNSPFMPLFSQNITFLSCPPRFTMSHFPIIDCLSNSTTSILATSSTSFVKSMS--TS 164

Query: 274 CRIISSLRYPASRYQDQQVLSSDLNMDISLTWDNPNCRDCAAGGGTCGYTNTTMQEIACF 95
           C I+ +L  P S   +    S+DLN D+ LTWD+P C  C   G  CGY + + Q I+CF
Sbjct: 165 CTIMKTLPVPVSNPDETNQFSTDLNGDLVLTWDSPACGICETEGRLCGYKSNSGQGISCF 224

Query: 94  DNTEKGHNKAMIAMIIVSVGIALPAI 17
           D      N  +  + I+ V I LP +
Sbjct: 225 DKYTSEENNGLRVLRIICVVILLPTL 250


>ref|XP_004133815.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis
           sativus]
          Length = 382

 Score =  125 bits (314), Expect = 4e-27
 Identities = 65/146 (44%), Positives = 86/146 (58%)
 Frame = -2

Query: 454 LDLSGSPFAVSSSRNYTLLSCPVEVTMSRFPIVDCLSNSTYSTLATSSVSFATAIANRTA 275
           ++ S SPF    S+N T LSCP   TMS FPI+DCLSNST S LATSS SF  +++  T+
Sbjct: 107 INFSNSPFMPLFSQNITFLSCPPRFTMSHFPIIDCLSNSTTSILATSSTSFVKSMS--TS 164

Query: 274 CRIISSLRYPASRYQDQQVLSSDLNMDISLTWDNPNCRDCAAGGGTCGYTNTTMQEIACF 95
           C I+ +L  P S   +    S+DLN D+ LTWD+P C  C   G  CGY + + Q I+CF
Sbjct: 165 CTIMKTLPVPVSNPDETNQFSTDLNGDLVLTWDSPACGICETEGRLCGYKSNSGQGISCF 224

Query: 94  DNTEKGHNKAMIAMIIVSVGIALPAI 17
           D      N  +  + I+ V I LP +
Sbjct: 225 DKYTSEENNGLRVLRIICVVILLPTL 250


>ref|XP_002277411.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Vitis
           vinifera]
          Length = 334

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/140 (42%), Positives = 87/140 (62%), Gaps = 1/140 (0%)
 Frame = -2

Query: 466 RLFTLDLSGSPFAVSSSRNYTLLSCPVEVTMSRFPIVDCLSNSTYSTLATSSVSFATAIA 287
           RL   D++GSPF      NYT L CP E+T  RF  +DCLSNST S LATSS+S    ++
Sbjct: 98  RLLAFDITGSPFMAEYYLNYTFLICPSELTRFRFTAIDCLSNSTSSVLATSSMSL---VS 154

Query: 286 NRTACRIISSLRYPAS-RYQDQQVLSSDLNMDISLTWDNPNCRDCAAGGGTCGYTNTTMQ 110
             ++C+I+++L  P S   Q+ +  SSDLN D+ LTWD P+C DC   GG+CG+ N++  
Sbjct: 155 KMSSCQILTTLAVPVSWHVQNDEDFSSDLNSDLQLTWDVPSCGDCEVQGGSCGFQNSSSL 214

Query: 109 EIACFDNTEKGHNKAMIAMI 50
           E+ CF       +++ I ++
Sbjct: 215 EVGCFSTPGTVSDRSSIFLV 234


>ref|XP_002320862.1| predicted protein [Populus trichocarpa] gi|222861635|gb|EEE99177.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score =  119 bits (297), Expect = 3e-25
 Identities = 67/154 (43%), Positives = 88/154 (57%), Gaps = 1/154 (0%)
 Frame = -2

Query: 466 RLFTLDLSGSPFAVSSSRNYTLLSCPVEVTMSRFPIVDCLSNSTYSTLATSSVSFATAIA 287
           RL  L+LSGSPFA    +NYT LSCP +  MSRFPI+DCLSNST S LATSS    T ++
Sbjct: 46  RLLQLNLSGSPFAAVFHQNYTFLSCPTQFVMSRFPIIDCLSNSTISVLATSSTFLVTLLS 105

Query: 286 NRTACRIISSLRYPAS-RYQDQQVLSSDLNMDISLTWDNPNCRDCAAGGGTCGYTNTTMQ 110
             + C +IS+L  PAS   Q  +  SS L+ D+ LTW +P+C  C   GGTCG+      
Sbjct: 106 --SLCDVISTLLIPASWPVQHYEGFSSKLSEDLLLTWFSPDCHQCETHGGTCGFHG---- 159

Query: 109 EIACFDNTEKGHNKAMIAMIIVSVGIALPAIAAC 8
                       N   + ++ VS+GI +  + AC
Sbjct: 160 ---------NASNSRQVGILFVSIGIPV-LVCAC 183


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