BLASTX nr result

ID: Atractylodes21_contig00035150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035150
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-co...   168   5e-40
ref|XP_002515412.1| RNA binding protein, putative [Ricinus commu...   167   6e-40
emb|CBI21155.3| unnamed protein product [Vitis vinifera]              166   1e-39
ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-co...   164   5e-39
ref|XP_003628951.1| U2-associated protein SR140 [Medicago trunca...   164   7e-39

>ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Glycine max]
          Length = 971

 Score =  168 bits (425), Expect = 5e-40
 Identities = 86/120 (71%), Positives = 89/120 (74%)
 Frame = -3

Query: 361 GFVAFMNRADGQAAKDEMQGVIVYEYELKIGWGKXXXXXXXXXXXXXPGHMAIRSKEGAX 182
           GFVAFMNRADGQAAKDEMQGV+VYEYELKIGWGK             PGHMAIRSKEG+ 
Sbjct: 233 GFVAFMNRADGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGST 292

Query: 181 XXXXXXXXXXXXXXXSQNSELVLTPNVPDITVVPPEDDHLRHVIDTMALYVLDGGCAFEQ 2
                          +QNSELVLTPNVPDI V PPEDDHLRHVIDTMALYVLDGGCAFEQ
Sbjct: 293 VILSGPSGPPVTTVPNQNSELVLTPNVPDIMVTPPEDDHLRHVIDTMALYVLDGGCAFEQ 352


>ref|XP_002515412.1| RNA binding protein, putative [Ricinus communis]
           gi|223545356|gb|EEF46861.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 979

 Score =  167 bits (424), Expect = 6e-40
 Identities = 86/120 (71%), Positives = 89/120 (74%)
 Frame = -3

Query: 361 GFVAFMNRADGQAAKDEMQGVIVYEYELKIGWGKXXXXXXXXXXXXXPGHMAIRSKEGAX 182
           GFVAFMNRADGQAAKDEMQGV+VYEYELKIGWGK             PGHMAIRSKEGA 
Sbjct: 232 GFVAFMNRADGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGAT 291

Query: 181 XXXXXXXXXXXXXXXSQNSELVLTPNVPDITVVPPEDDHLRHVIDTMALYVLDGGCAFEQ 2
                          + NSELVLTPNVPDI VVPP+DDHLRHVIDTMALYVLDGGCAFEQ
Sbjct: 292 VILSGPSGPPVTSVPNHNSELVLTPNVPDIMVVPPDDDHLRHVIDTMALYVLDGGCAFEQ 351


>emb|CBI21155.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score =  166 bits (421), Expect = 1e-39
 Identities = 86/120 (71%), Positives = 88/120 (73%)
 Frame = -3

Query: 361 GFVAFMNRADGQAAKDEMQGVIVYEYELKIGWGKXXXXXXXXXXXXXPGHMAIRSKEGAX 182
           GFVAFMNRADGQAAKDEMQGV+VYEYELKIGWGK             PGHMAIRSKEGA 
Sbjct: 234 GFVAFMNRADGQAAKDEMQGVVVYEYELKIGWGKSVSLPSQALPAPPPGHMAIRSKEGAT 293

Query: 181 XXXXXXXXXXXXXXXSQNSELVLTPNVPDITVVPPEDDHLRHVIDTMALYVLDGGCAFEQ 2
                          +QNSELVLTPNVPDI V PPEDDHL HVIDTMALYVLDGGCAFEQ
Sbjct: 294 VILSGPSGPPVTSVPNQNSELVLTPNVPDIMVSPPEDDHLHHVIDTMALYVLDGGCAFEQ 353


>ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Glycine max]
          Length = 972

 Score =  164 bits (416), Expect = 5e-39
 Identities = 84/120 (70%), Positives = 89/120 (74%)
 Frame = -3

Query: 361 GFVAFMNRADGQAAKDEMQGVIVYEYELKIGWGKXXXXXXXXXXXXXPGHMAIRSKEGAX 182
           GFVAFMNRADGQAAKDEMQGV+VYEYELKIGWGK             PGHMAIRSKEG+ 
Sbjct: 234 GFVAFMNRADGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGST 293

Query: 181 XXXXXXXXXXXXXXXSQNSELVLTPNVPDITVVPPEDDHLRHVIDTMALYVLDGGCAFEQ 2
                          +QNSELVLTPNVPDI V PPED+HLRHVIDTMAL+VLDGGCAFEQ
Sbjct: 294 VILSGPSGPPVTSVPNQNSELVLTPNVPDIMVTPPEDEHLRHVIDTMALHVLDGGCAFEQ 353


>ref|XP_003628951.1| U2-associated protein SR140 [Medicago truncatula]
           gi|355522973|gb|AET03427.1| U2-associated protein SR140
           [Medicago truncatula]
          Length = 1139

 Score =  164 bits (415), Expect = 7e-39
 Identities = 85/120 (70%), Positives = 88/120 (73%)
 Frame = -3

Query: 361 GFVAFMNRADGQAAKDEMQGVIVYEYELKIGWGKXXXXXXXXXXXXXPGHMAIRSKEGAX 182
           GFVAFMNRADGQAAKDEMQGV+VYEYELKIGWGK             PGHMAIRSKEG  
Sbjct: 263 GFVAFMNRADGQAAKDEMQGVVVYEYELKIGWGKSVALPSQALPAPPPGHMAIRSKEGNT 322

Query: 181 XXXXXXXXXXXXXXXSQNSELVLTPNVPDITVVPPEDDHLRHVIDTMALYVLDGGCAFEQ 2
                          SQNSELVLTPNVPDI V PPED+HL+HVIDTMALYVLDGGCAFEQ
Sbjct: 323 VILSGPSGPPVTSVPSQNSELVLTPNVPDIMVTPPEDEHLKHVIDTMALYVLDGGCAFEQ 382


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