BLASTX nr result

ID: Atractylodes21_contig00035106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035106
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001190536.1| cyclic nucleotide-gated ion channel 4 [Arabi...   209   2e-52
dbj|BAJ33894.1| unnamed protein product [Thellungiella halophila]     209   2e-52
ref|XP_002866035.1| ATCNGC4 [Arabidopsis lyrata subsp. lyrata] g...   209   2e-52
ref|NP_200236.1| cyclic nucleotide-gated ion channel 4 [Arabidop...   209   2e-52
ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putativ...   206   1e-51

>ref|NP_001190536.1| cyclic nucleotide-gated ion channel 4 [Arabidopsis thaliana]
           gi|332009092|gb|AED96475.1| cyclic nucleotide-gated ion
           channel 4 [Arabidopsis thaliana]
          Length = 689

 Score =  209 bits (532), Expect = 2e-52
 Identities = 98/114 (85%), Positives = 100/114 (87%)
 Frame = +3

Query: 3   SCCMLGPGNFSGDELLSWCLKRPFVERLPAXXXXXXXXXXXXAFGLDAEDVKYVTQHFRY 182
           SCCMLGPGNFSGDELLSWCL+RPFVERLP             AFGLDAEDVKYVTQHFRY
Sbjct: 548 SCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHFRY 607

Query: 183 TFVNEKVKMSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRC 344
           TFVNEKVK SARYYSPGWRTWAAVA+QLAWRRYKHRLTLTSLSFIRPRRPLSRC
Sbjct: 608 TFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSRC 661


>dbj|BAJ33894.1| unnamed protein product [Thellungiella halophila]
          Length = 626

 Score =  209 bits (532), Expect = 2e-52
 Identities = 98/114 (85%), Positives = 100/114 (87%)
 Frame = +3

Query: 3   SCCMLGPGNFSGDELLSWCLKRPFVERLPAXXXXXXXXXXXXAFGLDAEDVKYVTQHFRY 182
           SCCMLGPGNFSGDELLSWCL+RPFVERLP             AFGLDAEDVKYVTQHFRY
Sbjct: 486 SCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHFRY 545

Query: 183 TFVNEKVKMSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRC 344
           TFVNEKVK SARYYSPGWRTWAAVA+QLAWRRYKHRLTLTSLSFIRPRRPLSRC
Sbjct: 546 TFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSRC 599


>ref|XP_002866035.1| ATCNGC4 [Arabidopsis lyrata subsp. lyrata]
           gi|297311870|gb|EFH42294.1| ATCNGC4 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 694

 Score =  209 bits (532), Expect = 2e-52
 Identities = 98/114 (85%), Positives = 100/114 (87%)
 Frame = +3

Query: 3   SCCMLGPGNFSGDELLSWCLKRPFVERLPAXXXXXXXXXXXXAFGLDAEDVKYVTQHFRY 182
           SCCMLGPGNFSGDELLSWCL+RPFVERLP             AFGLDAEDVKYVTQHFRY
Sbjct: 553 SCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHFRY 612

Query: 183 TFVNEKVKMSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRC 344
           TFVNEKVK SARYYSPGWRTWAAVA+QLAWRRYKHRLTLTSLSFIRPRRPLSRC
Sbjct: 613 TFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSRC 666


>ref|NP_200236.1| cyclic nucleotide-gated ion channel 4 [Arabidopsis thaliana]
           gi|30696428|ref|NP_851188.1| cyclic nucleotide-gated ion
           channel 4 [Arabidopsis thaliana]
           gi|38503128|sp|Q94AS9.2|CNGC4_ARATH RecName: Full=Cyclic
           nucleotide-gated ion channel 4; Short=AtCNGC4; AltName:
           Full=Cyclic nucleotide- and calmodulin-regulated ion
           channel 4; Short=AtHLM1 gi|4581203|emb|CAB40129.1|
           cyclic nucleotide and calmodulin-regulated ion channel
           [Arabidopsis thaliana] gi|9759498|dbj|BAB10748.1| cyclic
           nucleotide and calmodulin-regulated ion channel
           [Arabidopsis thaliana] gi|16323174|gb|AAL15321.1|
           AT5g54250/MDK4_7 [Arabidopsis thaliana]
           gi|222423088|dbj|BAH19524.1| AT5G54250 [Arabidopsis
           thaliana] gi|332009090|gb|AED96473.1| cyclic
           nucleotide-gated ion channel 4 [Arabidopsis thaliana]
           gi|332009091|gb|AED96474.1| cyclic nucleotide-gated ion
           channel 4 [Arabidopsis thaliana]
          Length = 694

 Score =  209 bits (532), Expect = 2e-52
 Identities = 98/114 (85%), Positives = 100/114 (87%)
 Frame = +3

Query: 3   SCCMLGPGNFSGDELLSWCLKRPFVERLPAXXXXXXXXXXXXAFGLDAEDVKYVTQHFRY 182
           SCCMLGPGNFSGDELLSWCL+RPFVERLP             AFGLDAEDVKYVTQHFRY
Sbjct: 553 SCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHFRY 612

Query: 183 TFVNEKVKMSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRC 344
           TFVNEKVK SARYYSPGWRTWAAVA+QLAWRRYKHRLTLTSLSFIRPRRPLSRC
Sbjct: 613 TFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSRC 666


>ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223534910|gb|EEF36596.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 687

 Score =  206 bits (525), Expect = 1e-51
 Identities = 96/114 (84%), Positives = 100/114 (87%)
 Frame = +3

Query: 3   SCCMLGPGNFSGDELLSWCLKRPFVERLPAXXXXXXXXXXXXAFGLDAEDVKYVTQHFRY 182
           SCCMLGPGNFSGDELLSWCL+RPF+ERLP             AFGL+AEDVKYVTQHFRY
Sbjct: 547 SCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQHFRY 606

Query: 183 TFVNEKVKMSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRC 344
           TFVNE+VK SARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRC
Sbjct: 607 TFVNERVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRC 660


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