BLASTX nr result

ID: Atractylodes21_contig00035028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00035028
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...   395   e-108
ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22...   379   e-103
emb|CBI26044.3| unnamed protein product [Vitis vinifera]              366   4e-99
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...   366   4e-99
ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...   355   8e-96

>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
            predicted protein [Populus trichocarpa]
          Length = 1272

 Score =  395 bits (1016), Expect = e-108
 Identities = 198/265 (74%), Positives = 229/265 (86%), Gaps = 1/265 (0%)
 Frame = +1

Query: 10   GIESNSVNWAGDRVYLLQTISNVSVQLPAEPAADLAHNLLKRIEDFSMHSMEVNAHVKAL 189
            GIES+SV W  DRV+LLQTISNVSV+LP EPAA+LAHNLL RIE+FSMHS EVNAHVKAL
Sbjct: 622  GIESSSVEWVSDRVFLLQTISNVSVELPPEPAAELAHNLLIRIEEFSMHSTEVNAHVKAL 681

Query: 190  RTLCKQKAKTPEESDSLVIKWVHQLLSKASKTLEIYMVKDSEINKGSSLLTPP-SGTRKG 366
            RTLCK+KA   +E++SLVIKWV QLLSKAS+ LE Y+  DSE NKG +  TPP S TRKG
Sbjct: 682  RTLCKRKALDADEAESLVIKWVQQLLSKASRILEKYITGDSETNKGDAFFTPPRSATRKG 741

Query: 367  NRSSTTMSRLLAQAVAAVYTIGSLVIVCPSADLKAIVPILHNIITSGISDPKLKKLPALS 546
             R++  +SRLL++AV AVY+IG LVI+CPSAD   I+P+LH IITSG SDPKL KLP   
Sbjct: 742  KRAAA-LSRLLSEAVTAVYSIGFLVIICPSADTSTIIPLLHTIITSGNSDPKLSKLPGPQ 800

Query: 547  VSVKQTAPSLYIQAWLTMGKICLADDKLAKRYMPLFVQEMEKSNSAALRNNIVTTMADYC 726
            VS+KQTAPSLYIQAWLTMGKICLAD++LAKRY+PLFVQE+EKS+SAALRNN+V  MAD+C
Sbjct: 801  VSLKQTAPSLYIQAWLTMGKICLADEELAKRYIPLFVQELEKSDSAALRNNLVVMMADFC 860

Query: 727  VRYTALVDCYVSKITKCLRDPCELV 801
            +RYTALVDCY+SKITKCLRDPCELV
Sbjct: 861  IRYTALVDCYISKITKCLRDPCELV 885


>ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1|
            condensin, putative [Ricinus communis]
          Length = 1313

 Score =  379 bits (974), Expect = e-103
 Identities = 188/262 (71%), Positives = 217/262 (82%)
 Frame = +1

Query: 16   ESNSVNWAGDRVYLLQTISNVSVQLPAEPAADLAHNLLKRIEDFSMHSMEVNAHVKALRT 195
            ESNSV WAGDRV+LLQTISNVSV+LPAE AADLAHNLLKRIE+F+MHS EVNAHVKAL+ 
Sbjct: 664  ESNSVAWAGDRVFLLQTISNVSVELPAESAADLAHNLLKRIEEFNMHSTEVNAHVKALKI 723

Query: 196  LCKQKAKTPEESDSLVIKWVHQLLSKASKTLEIYMVKDSEINKGSSLLTPPSGTRKGNRS 375
            LCK+KA    E+D+LV+KW  Q+LS+ASK LE Y+  + E N  +S  TPP   +   + 
Sbjct: 724  LCKRKALDSGEADALVMKWAKQVLSRASKMLEKYISGNVEANNINSFFTPPRSQKSNGKR 783

Query: 376  STTMSRLLAQAVAAVYTIGSLVIVCPSADLKAIVPILHNIITSGISDPKLKKLPALSVSV 555
               M RLL++ V A YTIGSLVIVCPS D+ ++VP+LH IITSG SDPKL KLP   VS+
Sbjct: 784  GAAMCRLLSEVVTAAYTIGSLVIVCPSVDVSSVVPVLHTIITSGNSDPKLSKLPGPRVSL 843

Query: 556  KQTAPSLYIQAWLTMGKICLADDKLAKRYMPLFVQEMEKSNSAALRNNIVTTMADYCVRY 735
            KQTAPSLYIQAWLTMGKICLAD KLAKRY+PLFVQE+EKS+ AALRNN+V TMAD+CVRY
Sbjct: 844  KQTAPSLYIQAWLTMGKICLADGKLAKRYIPLFVQELEKSDCAALRNNLVVTMADFCVRY 903

Query: 736  TALVDCYVSKITKCLRDPCELV 801
            TALVDCY+SKITKCLRDPCELV
Sbjct: 904  TALVDCYISKITKCLRDPCELV 925


>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score =  366 bits (939), Expect = 4e-99
 Identities = 184/261 (70%), Positives = 216/261 (82%)
 Frame = +1

Query: 19   SNSVNWAGDRVYLLQTISNVSVQLPAEPAADLAHNLLKRIEDFSMHSMEVNAHVKALRTL 198
            SNSV WAGDRV+LL+TISNVSV+LP EPAA L HNLL RIE+F+MHS EVNAHVKALRTL
Sbjct: 665  SNSVAWAGDRVFLLKTISNVSVELPPEPAAALGHNLLTRIEEFNMHSTEVNAHVKALRTL 724

Query: 199  CKQKAKTPEESDSLVIKWVHQLLSKASKTLEIYMVKDSEINKGSSLLTPPSGTRKGNRSS 378
            CK++   P+E+D LV K VH+LLSKAS+ L+ Y+ + SE N  S   TPP G R+  R++
Sbjct: 725  CKRQVLNPDEADDLVQKCVHKLLSKASQILDKYISEASEANIDSDFRTPPGGARRKGRTA 784

Query: 379  TTMSRLLAQAVAAVYTIGSLVIVCPSADLKAIVPILHNIITSGISDPKLKKLPALSVSVK 558
             TMSR L++A+ AVYTIGSLVI+CPSA+L AI+PILH IITSG SD KL KL   +  +K
Sbjct: 785  LTMSRSLSRAITAVYTIGSLVIICPSANLDAIIPILHTIITSGSSDTKLNKLQGNTFPLK 844

Query: 559  QTAPSLYIQAWLTMGKICLADDKLAKRYMPLFVQEMEKSNSAALRNNIVTTMADYCVRYT 738
            Q APSLYI AW+TMGKICLAD +LAKRY+PLFVQE+EKS+ AALRNNIV T+AD+CVRYT
Sbjct: 845  QAAPSLYIHAWVTMGKICLADGELAKRYIPLFVQELEKSDCAALRNNIVVTLADFCVRYT 904

Query: 739  ALVDCYVSKITKCLRDPCELV 801
            ALVDCYVSKITKCLRD CELV
Sbjct: 905  ALVDCYVSKITKCLRDSCELV 925


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score =  366 bits (939), Expect = 4e-99
 Identities = 184/261 (70%), Positives = 216/261 (82%)
 Frame = +1

Query: 19   SNSVNWAGDRVYLLQTISNVSVQLPAEPAADLAHNLLKRIEDFSMHSMEVNAHVKALRTL 198
            SNSV WAGDRV+LL+TISNVSV+LP EPAA L HNLL RIE+F+MHS EVNAHVKALRTL
Sbjct: 706  SNSVAWAGDRVFLLKTISNVSVELPPEPAAALGHNLLTRIEEFNMHSTEVNAHVKALRTL 765

Query: 199  CKQKAKTPEESDSLVIKWVHQLLSKASKTLEIYMVKDSEINKGSSLLTPPSGTRKGNRSS 378
            CK++   P+E+D LV K VH+LLSKAS+ L+ Y+ + SE N  S   TPP G R+  R++
Sbjct: 766  CKRQVLNPDEADDLVQKCVHKLLSKASQILDKYISEASEANIDSDFRTPPGGARRKGRTA 825

Query: 379  TTMSRLLAQAVAAVYTIGSLVIVCPSADLKAIVPILHNIITSGISDPKLKKLPALSVSVK 558
             TMSR L++A+ AVYTIGSLVI+CPSA+L AI+PILH IITSG SD KL KL   +  +K
Sbjct: 826  LTMSRSLSRAITAVYTIGSLVIICPSANLDAIIPILHTIITSGSSDTKLNKLQGNTFPLK 885

Query: 559  QTAPSLYIQAWLTMGKICLADDKLAKRYMPLFVQEMEKSNSAALRNNIVTTMADYCVRYT 738
            Q APSLYI AW+TMGKICLAD +LAKRY+PLFVQE+EKS+ AALRNNIV T+AD+CVRYT
Sbjct: 886  QAAPSLYIHAWVTMGKICLADGELAKRYIPLFVQELEKSDCAALRNNIVVTLADFCVRYT 945

Query: 739  ALVDCYVSKITKCLRDPCELV 801
            ALVDCYVSKITKCLRD CELV
Sbjct: 946  ALVDCYVSKITKCLRDSCELV 966


>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score =  355 bits (910), Expect = 8e-96
 Identities = 176/264 (66%), Positives = 215/264 (81%), Gaps = 1/264 (0%)
 Frame = +1

Query: 13   IESNSVNWAGDRVYLLQTISNVSVQLPAEPAADLAHNLLKRIEDFSMHSMEVNAHVKALR 192
            IE N V WA DRV+LLQTISNVSV+LP  PAADLAHNLLKR+E F+MHS EV+AH+KAL+
Sbjct: 688  IECNHVAWASDRVFLLQTISNVSVELPPVPAADLAHNLLKRVEQFNMHSTEVDAHLKALK 747

Query: 193  TLCKQKAKTPEESDSLVIKWVHQLLSKASKTLEIYMVKDSEINKGSSLLTPP-SGTRKGN 369
            TLCK+KA   EE+++LV+KWVHQ+LS+AS  +E ++ ++SE N   S  TPP SGT KG 
Sbjct: 748  TLCKRKASNLEEAEALVLKWVHQVLSRASGIIEKFISENSEQNAEGSFFTPPRSGTSKG- 806

Query: 370  RSSTTMSRLLAQAVAAVYTIGSLVIVCPSADLKAIVPILHNIITSGISDPKLKKLPALSV 549
            R S   S+ L++AV A+YT+GS+VIVCPSAD+  +VP+LH IITSG S PKL  LP+ S 
Sbjct: 807  RKSVAKSKSLSKAVTAIYTVGSVVIVCPSADMSNLVPLLHTIITSGSSGPKLNNLPSPST 866

Query: 550  SVKQTAPSLYIQAWLTMGKICLADDKLAKRYMPLFVQEMEKSNSAALRNNIVTTMADYCV 729
            S++Q APS YIQ WL MGK+CLAD KLAK Y+PLFVQE+EKS SAALRNNIV  MAD+CV
Sbjct: 867  SLQQEAPSFYIQGWLAMGKLCLADGKLAKNYIPLFVQELEKSKSAALRNNIVVMMADFCV 926

Query: 730  RYTALVDCYVSKITKCLRDPCELV 801
            R+TALVDCY++KIT+CL DPCELV
Sbjct: 927  RFTALVDCYITKITRCLLDPCELV 950


Top