BLASTX nr result

ID: Atractylodes21_contig00034997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034997
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327543.1| nucleosome/chromatin assembly factor group [...    94   9e-18
ref|XP_002527406.1| WD-repeat protein, putative [Ricinus communi...    87   1e-15
emb|CAB52219.1| X1 protein [Silene latifolia]                          84   9e-15
emb|CAC81926.1| putative WD-repeat protein [Silene latifolia]          84   9e-15
emb|CAC81927.1| putative WD-repeat protein [Silene latifolia]          84   9e-15

>ref|XP_002327543.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
           gi|222836097|gb|EEE74518.1| nucleosome/chromatin
           assembly factor group [Populus trichocarpa]
          Length = 465

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/70 (67%), Positives = 52/70 (74%), Gaps = 3/70 (4%)
 Frame = -3

Query: 202 WSIHDHISTLATEPGLTKSPGASGGKNP---KTGGVDDNRTESPVIQARGVFQGHEDTVE 32
           WSI DHISTLA EPGL+KSPG+ G  N    K GG +D RT+SP I  R V+QGH DTVE
Sbjct: 192 WSIQDHISTLAAEPGLSKSPGSGGFPNKSASKAGGGNDKRTKSPSIGPRDVYQGHTDTVE 251

Query: 31  DVQFCPSRAQ 2
           DVQFCPS AQ
Sbjct: 252 DVQFCPSSAQ 261


>ref|XP_002527406.1| WD-repeat protein, putative [Ricinus communis]
           gi|223533216|gb|EEF34972.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 466

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/69 (62%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
 Frame = -3

Query: 202 WSIHDHISTLATEPGLTKSPGASGGKNP---KTGGVDDNRTESPVIQARGVFQGHEDTVE 32
           WSI DHIS LA +P   KSPG+SG       K GG +D  T+SP I  RG+FQGHEDTVE
Sbjct: 192 WSIQDHISVLAADPVSLKSPGSSGSSTKHASKAGGSNDKSTKSPSIGPRGIFQGHEDTVE 251

Query: 31  DVQFCPSRA 5
           DVQFCPS A
Sbjct: 252 DVQFCPSSA 260


>emb|CAB52219.1| X1 protein [Silene latifolia]
          Length = 472

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/67 (62%), Positives = 49/67 (73%)
 Frame = -3

Query: 202 WSIHDHISTLATEPGLTKSPGASGGKNPKTGGVDDNRTESPVIQARGVFQGHEDTVEDVQ 23
           WSIHDHISTLATEPG  KSP +  G N K  G  +  +++P I  RG++ GHEDTVEDVQ
Sbjct: 197 WSIHDHISTLATEPGSAKSPNS--GSNIKKAG--NGNSDNPSIGPRGIYLGHEDTVEDVQ 252

Query: 22  FCPSRAQ 2
           FCPS AQ
Sbjct: 253 FCPSSAQ 259


>emb|CAC81926.1| putative WD-repeat protein [Silene latifolia]
          Length = 429

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/67 (62%), Positives = 49/67 (73%)
 Frame = -3

Query: 202 WSIHDHISTLATEPGLTKSPGASGGKNPKTGGVDDNRTESPVIQARGVFQGHEDTVEDVQ 23
           WSIHDHISTLATEPG  KSP +  G N K  G  +  +++P I  RG++ GHEDTVEDVQ
Sbjct: 154 WSIHDHISTLATEPGSAKSPNS--GSNIKKAG--NGNSDNPSIGPRGIYLGHEDTVEDVQ 209

Query: 22  FCPSRAQ 2
           FCPS AQ
Sbjct: 210 FCPSSAQ 216


>emb|CAC81927.1| putative WD-repeat protein [Silene latifolia]
          Length = 473

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/67 (62%), Positives = 49/67 (73%)
 Frame = -3

Query: 202 WSIHDHISTLATEPGLTKSPGASGGKNPKTGGVDDNRTESPVIQARGVFQGHEDTVEDVQ 23
           WSIHDHISTLATEPG  KSP +  G N K  G  +  +++P I  RG++ GHEDTVEDVQ
Sbjct: 198 WSIHDHISTLATEPGSAKSPNS--GSNIKKAG--NGNSDNPSIGPRGIYLGHEDTVEDVQ 253

Query: 22  FCPSRAQ 2
           FCPS AQ
Sbjct: 254 FCPSSAQ 260


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