BLASTX nr result

ID: Atractylodes21_contig00034979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034979
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512413.1| conserved hypothetical protein [Ricinus comm...    63   2e-08
ref|NP_198117.2| PWWP domain-containing protein [Arabidopsis tha...    61   8e-08
dbj|BAH30603.1| hypothetical protein [Arabidopsis thaliana]            61   8e-08
ref|XP_003535335.1| PREDICTED: uncharacterized protein LOC100812...    60   2e-07
ref|XP_002319529.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|XP_002512413.1| conserved hypothetical protein [Ricinus communis]
            gi|223548374|gb|EEF49865.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1141

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/69 (46%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
 Frame = -1

Query: 187  PTQTPPLPLGGKF-------VHNLQRPNIGGDTTPTPKVDISHQMLGLLTKCNEVVTNVT 29
            P+ +P LPL  +F       +H+ + P         P +DIS QML LLT+CN+VVT VT
Sbjct: 1071 PSPSPILPLPTQFAKPPLNNLHHTEAPIRNMHNLNPPSIDISQQMLSLLTRCNDVVTTVT 1130

Query: 28   NMLGYVPYH 2
             +LGYVPYH
Sbjct: 1131 GLLGYVPYH 1139


>ref|NP_198117.2| PWWP domain-containing protein [Arabidopsis thaliana]
            gi|332006328|gb|AED93711.1| PWWP domain-containing
            protein [Arabidopsis thaliana]
          Length = 1072

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/67 (50%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
 Frame = -1

Query: 187  PTQTPPLPLGGKFVHNLQRP-----NIGGDTTPTPKVDISHQMLGLLTKCNEVVTNVTNM 23
            P  T P  L  K V +++ P     N  G        DISHQML LL+KCNEVV NVT +
Sbjct: 1004 PQYTKPQQLPIKPVDHVEPPMPPSRNFRGPIPAVSAGDISHQMLNLLSKCNEVVANVTGL 1063

Query: 22   LGYVPYH 2
            LGYVPYH
Sbjct: 1064 LGYVPYH 1070


>dbj|BAH30603.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1063

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/67 (50%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
 Frame = -1

Query: 187  PTQTPPLPLGGKFVHNLQRP-----NIGGDTTPTPKVDISHQMLGLLTKCNEVVTNVTNM 23
            P  T P  L  K V +++ P     N  G        DISHQML LL+KCNEVV NVT +
Sbjct: 995  PQYTKPQQLPIKPVDHVEPPMPPSRNFRGPIPAVSAGDISHQMLNLLSKCNEVVANVTGL 1054

Query: 22   LGYVPYH 2
            LGYVPYH
Sbjct: 1055 LGYVPYH 1061


>ref|XP_003535335.1| PREDICTED: uncharacterized protein LOC100812480 [Glycine max]
          Length = 1045

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
 Frame = -1

Query: 184  TQTPPLPLGGKFVHNLQRPNIGGDTTPT----------PKVDISHQMLGLLTKCNEVVTN 35
            T  PP        HNL    +    TP           P VDIS QM+ LLT+CN++V N
Sbjct: 973  TPPPPTQFTKILQHNLHNSEMAPRNTPNFINATTSATAPTVDISQQMISLLTRCNDIVNN 1032

Query: 34   VTNMLGYVPYH 2
            +T++LGYVPYH
Sbjct: 1033 LTSLLGYVPYH 1043


>ref|XP_002319529.1| predicted protein [Populus trichocarpa] gi|222857905|gb|EEE95452.1|
            predicted protein [Populus trichocarpa]
          Length = 1024

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/70 (48%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
 Frame = -1

Query: 187  PTQTPPLPLGGKFVHNLQRP-NIGGDTTP-------TPKVDISHQMLGLLTKCNEVVTNV 32
            PTQ    PL     H    P N     TP       TP +DIS QML LLT CN+VVT+V
Sbjct: 953  PTQFAKAPLNYSQHHTEVAPRNSHNFNTPPPSAGPSTPSIDISQQMLSLLTTCNDVVTSV 1012

Query: 31   TNMLGYVPYH 2
            + +LGYVPYH
Sbjct: 1013 SGLLGYVPYH 1022


Top