BLASTX nr result

ID: Atractylodes21_contig00034949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034949
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873838.1| hypothetical protein ARALYDRAFT_488627 [Arab...    56   3e-06
ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...    55   5e-06

>ref|XP_002873838.1| hypothetical protein ARALYDRAFT_488627 [Arabidopsis lyrata subsp.
           lyrata] gi|297319675|gb|EFH50097.1| hypothetical protein
           ARALYDRAFT_488627 [Arabidopsis lyrata subsp. lyrata]
          Length = 362

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 16/100 (16%)
 Frame = +3

Query: 183 DQDAQEIRRSTSLGSMSCQNPNLLIADILRVEEEYEDDDHEQVGPSK----GE------- 329
           D+D+  IRRS SL S       + IAD+LR  E+ E+++   VG S+    GE       
Sbjct: 266 DEDSLPIRRSVSLNSGVV---GVSIADVLREIEDEEEEESGGVGTSQRREEGEDGGGKTL 322

Query: 330 -----NSKSTKRSNTMKRSVSTGRFMFTRNDKGKNSILPN 434
                N +S   SN + RS+STGRF+F+R D+G+N  LPN
Sbjct: 323 PPTEANQRSGGVSNFLVRSLSTGRFIFSRYDRGRNYRLPN 362


>ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 370

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
 Frame = +3

Query: 183 DQDAQEIRRSTSLGSMSCQNPNLLIADILRVEEEYEDDDHEQVGPSK---GENSKSTKRS 353
           D+    IRR+ S+     +   L IAD+L V +E+E   +   GPSK   GE+SKS+ R 
Sbjct: 276 DEGYDSIRRTVSMDHSFQRGSGLSIADVLHVNQEHEGCSNG-AGPSKNSRGESSKSSYRR 334

Query: 354 NT---------MKRSVSTGRFMFTRNDKGKNSILP 431
                      MKRS S+GRF  +RN +GK  +LP
Sbjct: 335 RVLHCVLSPIAMKRSFSSGRFSLSRNGRGKQWVLP 369