BLASTX nr result

ID: Atractylodes21_contig00034869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034869
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512712.1| U2 small nuclear ribonucleoprotein A, putati...    89   4e-16
ref|XP_002303732.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
ref|XP_002299368.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_004157628.1| PREDICTED: U2 small nuclear ribonucleoprotei...    79   5e-13
ref|XP_004140564.1| PREDICTED: U2 small nuclear ribonucleoprotei...    79   5e-13

>ref|XP_002512712.1| U2 small nuclear ribonucleoprotein A, putative [Ricinus communis]
           gi|223548673|gb|EEF50164.1| U2 small nuclear
           ribonucleoprotein A, putative [Ricinus communis]
          Length = 287

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 50/93 (53%), Positives = 55/93 (59%)
 Frame = +3

Query: 3   NYRLYVIHKLKALRVLDFKKVKRKERIXXXXXXXXXXXXXXXXXXXXXTFVPGEVPSVPE 182
           NYRLY+IHKLK+LRVLDFKKVK KER+                     TF+PGEVP+V E
Sbjct: 130 NYRLYIIHKLKSLRVLDFKKVKSKERMEAENLFASKEVEEEAIRESAKTFIPGEVPNVTE 189

Query: 183 DHXXXXXXXXXXXXXXQIIAIKAAIVNSQTLEE 281
           D               QIIAIKAAIVNSQTLEE
Sbjct: 190 DAEEQQNPKVVAPTPEQIIAIKAAIVNSQTLEE 222


>ref|XP_002303732.1| predicted protein [Populus trichocarpa] gi|222841164|gb|EEE78711.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/93 (52%), Positives = 53/93 (56%)
 Frame = +3

Query: 3   NYRLYVIHKLKALRVLDFKKVKRKERIXXXXXXXXXXXXXXXXXXXXXTFVPGEVPSVPE 182
           NYRLYVIHKLK+LRVLDFKKVK KER                      TF PGE+P++PE
Sbjct: 130 NYRLYVIHKLKSLRVLDFKKVKAKERAEAEHLFSSKEVEEEAKRESVKTFTPGEIPNIPE 189

Query: 183 DHXXXXXXXXXXXXXXQIIAIKAAIVNSQTLEE 281
                           QIIAIKAAIVNSQTLEE
Sbjct: 190 VAEEQQAPKVVAPTPEQIIAIKAAIVNSQTLEE 222


>ref|XP_002299368.1| predicted protein [Populus trichocarpa] gi|222846626|gb|EEE84173.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 50/93 (53%), Positives = 52/93 (55%)
 Frame = +3

Query: 3   NYRLYVIHKLKALRVLDFKKVKRKERIXXXXXXXXXXXXXXXXXXXXXTFVPGEVPSVPE 182
           NYRLYVIHKLK+LRVLDFKKVK KER                      TF PGEVP+V E
Sbjct: 130 NYRLYVIHKLKSLRVLDFKKVKGKERAEAEHLFASKEVEEEARRESVKTFTPGEVPNVLE 189

Query: 183 DHXXXXXXXXXXXXXXQIIAIKAAIVNSQTLEE 281
                           QIIAIKAAIVNSQTLEE
Sbjct: 190 GAEEQQAPKVVAPTPDQIIAIKAAIVNSQTLEE 222


>ref|XP_004157628.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like, partial
           [Cucumis sativus]
          Length = 275

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 46/93 (49%), Positives = 51/93 (54%)
 Frame = +3

Query: 3   NYRLYVIHKLKALRVLDFKKVKRKERIXXXXXXXXXXXXXXXXXXXXXTFVPGEVPSVPE 182
           NYRLYVIHKLK++RVLDFKKV+ KER+                     TFVPGEV    +
Sbjct: 130 NYRLYVIHKLKSVRVLDFKKVRNKERLEARNLFSSKEVEEEAKKESVKTFVPGEVEKASK 189

Query: 183 DHXXXXXXXXXXXXXXQIIAIKAAIVNSQTLEE 281
                           QIIAIKAAIVNSQTLEE
Sbjct: 190 PVEEKQTPNVSAPTPEQIIAIKAAIVNSQTLEE 222


>ref|XP_004140564.1| PREDICTED: U2 small nuclear ribonucleoprotein A'-like [Cucumis
           sativus]
          Length = 279

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 46/93 (49%), Positives = 51/93 (54%)
 Frame = +3

Query: 3   NYRLYVIHKLKALRVLDFKKVKRKERIXXXXXXXXXXXXXXXXXXXXXTFVPGEVPSVPE 182
           NYRLYVIHKLK++RVLDFKKV+ KER+                     TFVPGEV    +
Sbjct: 130 NYRLYVIHKLKSVRVLDFKKVRNKERLEARNLFSSKEVEEEAKKESVKTFVPGEVEKASK 189

Query: 183 DHXXXXXXXXXXXXXXQIIAIKAAIVNSQTLEE 281
                           QIIAIKAAIVNSQTLEE
Sbjct: 190 PVEEKQTPNVSAPTPEQIIAIKAAIVNSQTLEE 222