BLASTX nr result

ID: Atractylodes21_contig00034848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034848
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...    69   4e-10
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    64   1e-08
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    63   2e-08

>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
 Frame = -1

Query: 388 GIFSTIYAGEIIPNWISDRRKGSSISFTMPSSP-KKLRGFNVCYVYTMRK-PTSLNGYRV 215
           GIFS    G  +P+W S +++ +S+SF +P  P +K+RG N+C VY +R           
Sbjct: 281 GIFSIFLPGSEVPSWYSHQKQNNSVSFAVPPLPSRKIRGLNLCIVYGLRNTDKKCATLYP 340

Query: 214 PDIRISNVTKNRSWTYRWSGPGDFWYVGNLIFLSHWMFEKKEMEDGDQVTIDIGYFTREL 35
           PD  ISN TK   W+Y     G      ++++LSHW F   ++E GDQV +     +  +
Sbjct: 341 PDAEISNKTKVLKWSYNPIVYGVPQIGEDMLWLSHWRFGTDQLEVGDQVNV-----SASV 395

Query: 34  AHSVLIKECGI 2
                +K+CG+
Sbjct: 396 TPDFQVKKCGV 406


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
 Frame = -1

Query: 388  GIFSTIYAGEIIPNWISDRRKGSSISFTMPSSP-KKLRGFNVCYVYTMRKPTSLNGYRVP 212
            GIFS    G  IP W + R + SSISF + + P  K++G ++C +YT  K          
Sbjct: 981  GIFSIFLPGNTIPEWFNQRSESSSISFEVEAKPGHKIKGLSLCTLYTYDKLEGGGYIDEN 1040

Query: 211  DIRISNVTKNRSWTYRWSGPGDFWYVGNLIFLSHWMFEKKEMEDGDQVTIDIGYFTRELA 32
              +I+N T    WTY  +  G    +  +++LSHW F   ++E GD+V I +     E+A
Sbjct: 1041 CAKINNKTICEKWTYSPTFYGMPKPLEEMLWLSHWTF-GDQLEVGDEVHILV-----EMA 1094

Query: 31   HSVLIKECGI 2
              + +K+CGI
Sbjct: 1095 SGLTVKKCGI 1104


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
 Frame = -1

Query: 388  GIFSTIYAGEIIPNWISDRRKGSSISFTM-PSSPKKLRGFNVCYVYTMRKPTSLNGYRVP 212
            GI S   AG  +P+W   +  GSS+SFT+ P S  K+RG N+C VY              
Sbjct: 892  GIVSFFLAGNEVPHWFDHKSTGSSLSFTINPLSDYKIRGLNLCTVYARDHEVYWLHAAGH 951

Query: 211  DIRISNVTKNRSWTYR---WSGPGDFWYVGNLIFLSHWMFEKKEMEDGDQVTIDIGYFTR 41
              R++N TK  +W+Y    ++ P D     ++++LS+W F   E E GD+V + +     
Sbjct: 952  YARMNNETKGTNWSYSPTFYALPED--DDEDMLWLSYWKF-GGEFEVGDKVNVSV----- 1003

Query: 40   ELAHSVLIKECGI 2
             +     +KECGI
Sbjct: 1004 RMPFGYYVKECGI 1016


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
 Frame = -1

Query: 397  YQFGIFSTIYAGEIIPNWISDRRKGSSISFTM-PSSPKKLRGFNVCYVYT---MRKPTSL 230
            ++ GI S    G  +P W S + +G  ISFTM PS  +K+ G N+C VYT   +R   + 
Sbjct: 967  HECGICSIFLPGSEVPGWYSPQNEGPLISFTMPPSHVRKVCGLNICIVYTCNDVRNGLTD 1026

Query: 229  NGYRVPDIRISNVTKNRSWTYRWSGPGDFWYVGNLIFLSHWMFEKKEMEDGDQVTIDIGY 50
            + Y    I+I N TK+  WTY     G      ++++LSHW  E   +E GDQ+ +    
Sbjct: 1027 HHY----IKIWNKTKDLKWTYSPIFYGIPEPEKSMLWLSHWKLEDL-LEGGDQLNVSAVM 1081

Query: 49   FTRELAHSVLI 17
             T   A ++ I
Sbjct: 1082 STGYQAKNIRI 1092


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