BLASTX nr result

ID: Atractylodes21_contig00034833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034833
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 103   1e-20
ref|XP_004150126.1| PREDICTED: uncharacterized protein LOC101221...    99   3e-19
emb|CAN70290.1| hypothetical protein VITISV_019345 [Vitis vinifera]    99   3e-19
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                  98   8e-19
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...    95   5e-18

>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/110 (44%), Positives = 71/110 (64%), Gaps = 3/110 (2%)
 Frame = -3

Query: 354 PFEKHPEPHNIVWINNGEGIKVTERRRVPMSIGKFYKDEVMCDVV-DMNACYLLLGRPWQ 178
           P ++HP P+ + W++   G++V ++  +  SIGK YKDEV+CDVV  M+AC+LLLGRPW+
Sbjct: 435 PTQEHPNPYKLRWLSKDSGVRVDKQCIISFSIGKMYKDEVLCDVVVPMDACHLLLGRPWE 494

Query: 177 YDLGTIHDGKENVYRFLKNETKITL--LPPDFKQKYEPRKVEHLLTVSYI 34
           YD  T H GK+NVY F     K+TL  LPP+ +    P   E +  V ++
Sbjct: 495 YDRNTTHQGKDNVYIFKHQGKKVTLTPLPPNQRDYGSPNVPEEMSGVLFL 544


>ref|XP_004150126.1| PREDICTED: uncharacterized protein LOC101221019 [Cucumis sativus]
          Length = 390

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 42/84 (50%), Positives = 57/84 (67%)
 Frame = -3

Query: 348 EKHPEPHNIVWINNGEGIKVTERRRVPMSIGKFYKDEVMCDVVDMNACYLLLGRPWQYDL 169
           E HP P+ I W+  G    V+E   VP+SIG  YKD+++CDV++M+ C+LLLGRPWQYD 
Sbjct: 81  EAHPTPYKIGWVKKGGEATVSEICTVPLSIGNAYKDQIVCDVIEMDVCHLLLGRPWQYDT 140

Query: 168 GTIHDGKENVYRFLKNETKITLLP 97
            ++H G+EN Y F     K+ LLP
Sbjct: 141 QSLHKGRENTYEFQWMGRKVVLLP 164


>emb|CAN70290.1| hypothetical protein VITISV_019345 [Vitis vinifera]
          Length = 1464

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 40/84 (47%), Positives = 61/84 (72%)
 Frame = -3

Query: 348  EKHPEPHNIVWINNGEGIKVTERRRVPMSIGKFYKDEVMCDVVDMNACYLLLGRPWQYDL 169
            ++HP  + I WIN G  ++V E  ++P+SIGK+YKDE++CDV+DM+ACY+LLGR W YD+
Sbjct: 785  KEHPSSYKIAWINKGMKVQVLEVCKIPLSIGKYYKDEIVCDVLDMDACYILLGRSWHYDV 844

Query: 168  GTIHDGKENVYRFLKNETKITLLP 97
               + G++N + F   + KI L+P
Sbjct: 845  DVTYKGQDNTFVFWWFDKKIVLMP 868


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
 Frame = -3

Query: 354 PFEKHPEPHNIVWINNGEGIKVTERRRVPMSIGKFYKDEVMCDVVDMNACYLLLGRPWQY 175
           P + HP P+ + W+N G  ++V ++  V  SIGK Y DE +CDV+ M+AC+LLLGRPW++
Sbjct: 424 PTQDHPSPYKLRWLNKGAEVRVDKQCLVTFSIGKNYSDEALCDVLPMDACHLLLGRPWEF 483

Query: 174 DLGTIHDGKENVYRFLKNETKITL--LPPDFKQKYEPRKVE 58
           D  ++H G++N Y F     K+ L  LPP  K    P  +E
Sbjct: 484 DRDSVHHGRDNTYTFKFRSRKVILTPLPPVLKHTTPPSMLE 524


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/93 (46%), Positives = 63/93 (67%)
 Frame = -3

Query: 354 PFEKHPEPHNIVWINNGEGIKVTERRRVPMSIGKFYKDEVMCDVVDMNACYLLLGRPWQY 175
           P  +HP+P+ + W+N+   +KV ++  + +SIGK Y+D+V+CDV+ M+AC++LLGRPWQY
Sbjct: 440 PTIQHPQPYKLQWLNDDGELKVHKQALISISIGK-YQDDVLCDVIPMHACHILLGRPWQY 498

Query: 174 DLGTIHDGKENVYRFLKNETKITLLPPDFKQKY 76
           D  T+H GK N Y   K   K TL P   K+ Y
Sbjct: 499 DRDTLHHGKTNKYTIHKGGKKYTLTPLAPKEVY 531


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