BLASTX nr result

ID: Atractylodes21_contig00034828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034828
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]          55   3e-11
gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group...    50   9e-09
ref|NP_001172702.1| Os01g0909600 [Oryza sativa Japonica Group] g...    44   1e-07
gb|EEC72005.1| hypothetical protein OsI_04866 [Oryza sativa Indi...    44   1e-07
gb|ABA95799.2| retrotransposon protein, putative, unclassified, ...    46   4e-07

>emb|CAE05707.2| OSJNBb0065J09.3 [Oryza sativa Japonica Group]
          Length = 1015

 Score = 54.7 bits (130), Expect(3) = 3e-11
 Identities = 32/81 (39%), Positives = 44/81 (54%)
 Frame = -1

Query: 348 EKGTCRRLETGTWRNGLWYLDRVGMDTTLASMVARVETREPVSSVETKLLLHHQRMEH*Y 169
           E+ T R+L  G  +NGLWYLDR G +  L S +A   + E     E +L+L H R+ H  
Sbjct: 80  ERRTGRKLGIGIRQNGLWYLDRSGTNKALCSALAVGTSEE-----EARLILQHCRLGHMC 134

Query: 168 FSLLRFLYPSIYEKAN*QKLV 106
           F  +R +YP    K +  KLV
Sbjct: 135 FETMRKIYPDEMSKVDRSKLV 155



 Score = 33.9 bits (76), Expect(3) = 3e-11
 Identities = 16/30 (53%), Positives = 17/30 (56%)
 Frame = -2

Query: 104 CEFGKHTRXXXXXXXXXXXSFFYLIHSDVW 15
           CE+GKHTR           S F LIHSDVW
Sbjct: 159 CEYGKHTRATYISRGLRSISPFMLIHSDVW 188



 Score = 25.0 bits (53), Expect(3) = 3e-11
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -3

Query: 496 SEWIVDSCATRHVT 455
           S WI+DS A+RHVT
Sbjct: 39  STWILDSGASRHVT 52


>gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108711651|gb|ABF99446.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1393

 Score = 50.1 bits (118), Expect(2) = 9e-09
 Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
 Frame = -3

Query: 649 EVWRKMKLASDNNKKXXXXXXXTPPSRGNIAIYVY*DIGVHALASLPTTRAS-EWIVDSC 473
           E W+K K    +N              GN A Y     G  A A   T R   +WI+DS 
Sbjct: 359 EEWQKNKTNESSNTTTHF---------GNFANYAQVGEGTQAQALASTYRHPIDWIIDSG 409

Query: 472 ATRHVTGAQHEFLTYAHLAVPESIQTTDGTAQPV 371
           A++HVTG  + F +Y      E+IQ  DGT++P+
Sbjct: 410 ASKHVTGLHNTFTSYTPYIHSETIQIADGTSKPI 443



 Score = 35.8 bits (81), Expect(2) = 9e-09
 Identities = 24/60 (40%), Positives = 36/60 (60%)
 Frame = -1

Query: 354 F*EKGTCRRLETGTWRNGLWYLDRVGMDTTLASMVARVETREPVSSVETKLLLHHQRMEH 175
           F EKGT RR+ TG  R+GLWY++    +  LA++V  VE  + +S      LLH++ + H
Sbjct: 470 FQEKGTGRRIGTGVRRDGLWYINH--EELGLAAVVGDVE--KEIS------LLHYEGIIH 519


>ref|NP_001172702.1| Os01g0909600 [Oryza sativa Japonica Group]
           gi|255673983|dbj|BAH91432.1| Os01g0909600 [Oryza sativa
           Japonica Group]
          Length = 331

 Score = 44.3 bits (103), Expect(2) = 1e-07
 Identities = 27/81 (33%), Positives = 42/81 (51%)
 Frame = -1

Query: 348 EKGTCRRLETGTWRNGLWYLDRVGMDTTLASMVARVETREPVSSVETKLLLHHQRMEH*Y 169
           E+GT RR+ TG  RNGLWY++    +  LA++    E          +++L H R+ H  
Sbjct: 181 ERGTGRRIGTGVRRNGLWYIN--NEEVGLAAVAGNAE----------EIILLHCRLGHPS 228

Query: 168 FSLLRFLYPSIYEKAN*QKLV 106
           F  +  LYP ++   N  +LV
Sbjct: 229 FDNVSKLYPILFNGVNKSRLV 249



 Score = 37.7 bits (86), Expect(2) = 1e-07
 Identities = 17/32 (53%), Positives = 17/32 (53%)
 Frame = -2

Query: 104 CEFGKHTRXXXXXXXXXXXSFFYLIHSDVWGP 9
           CEFGKHTR             F LIH DVWGP
Sbjct: 253 CEFGKHTRTPYVGSGLRSYEPFILIHYDVWGP 284


>gb|EEC72005.1| hypothetical protein OsI_04866 [Oryza sativa Indica Group]
          Length = 285

 Score = 44.3 bits (103), Expect(2) = 1e-07
 Identities = 27/81 (33%), Positives = 42/81 (51%)
 Frame = -1

Query: 348 EKGTCRRLETGTWRNGLWYLDRVGMDTTLASMVARVETREPVSSVETKLLLHHQRMEH*Y 169
           E+GT RR+ TG  RNGLWY++    +  LA++    E          +++L H R+ H  
Sbjct: 135 ERGTGRRIGTGVRRNGLWYIN--NEEVGLAAVAGNAE----------EIILLHCRLGHPS 182

Query: 168 FSLLRFLYPSIYEKAN*QKLV 106
           F  +  LYP ++   N  +LV
Sbjct: 183 FDNVSKLYPILFNGVNKSRLV 203



 Score = 37.7 bits (86), Expect(2) = 1e-07
 Identities = 17/32 (53%), Positives = 17/32 (53%)
 Frame = -2

Query: 104 CEFGKHTRXXXXXXXXXXXSFFYLIHSDVWGP 9
           CEFGKHTR             F LIH DVWGP
Sbjct: 207 CEFGKHTRTPYVGSGLRSYEPFILIHYDVWGP 238


>gb|ABA95799.2| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 2156

 Score = 46.2 bits (108), Expect(2) = 4e-07
 Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
 Frame = -1

Query: 348  EKGTCRRLETGTWRNGLWYLDR--VGMDTTLASMVARVETREPVSSVETKLLLHHQRMEH 175
            E+ T ++L TG  R+GLWYLDR     D  LA M +        S  E K+LL H R+ H
Sbjct: 809  ERQTGKKLGTGVRRDGLWYLDRKETSEDVCLALMAS-------TSKEEAKVLLLHCRLGH 861

Query: 174  *YFSLLRFLYPSIYEKAN*QKLV 106
              F  +  ++P+   + +  KLV
Sbjct: 862  ISFETMSKMFPAELSRVDKHKLV 884



 Score = 33.9 bits (76), Expect(2) = 4e-07
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -2

Query: 104 CEFGKHTRXXXXXXXXXXXSFFYLIHSDVW 15
           CE+GKHTR             F LIHSDVW
Sbjct: 888 CEYGKHTRTSYVSRGLRSMLPFMLIHSDVW 917


Top