BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034820
         (1340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300266.1| predicted protein [Populus trichocarpa] gi|2...   560   e-157
ref|XP_002265287.1| PREDICTED: ribosomal RNA large subunit methy...   550   e-154
ref|XP_004136937.1| PREDICTED: dual-specificity RNA methyltransf...   545   e-152
ref|NP_188597.1| radical SAM domain-containing protein [Arabidop...   526   e-147
ref|XP_003558557.1| PREDICTED: ribosomal RNA large subunit methy...   520   e-145

>ref|XP_002300266.1| predicted protein [Populus trichocarpa] gi|222847524|gb|EEE85071.1|
            predicted protein [Populus trichocarpa]
          Length = 373

 Score =  560 bits (1442), Expect = e-157
 Identities = 282/365 (77%), Positives = 308/365 (84%)
 Frame = +3

Query: 66   SVFDAAFIRTEFDKLGINTHFIPSIWKYVIQNPNCEWREIPSLPSAVYSLLSSKFKPCTS 245
            S+FD   +R EF+K GINTHFIP IWKYVI+NPNCEW +IP LPSA YSLL SKFK  TS
Sbjct: 5    SIFDGPDVRAEFEKAGINTHFIPFIWKYVIKNPNCEWDDIPDLPSAAYSLLRSKFKTSTS 64

Query: 246  IVDSVIDSTDQVTTKLLIKLQNGAFVEAVIMRYDTRLXXXXXXXXXXXXXSTLCISSQVG 425
             VDSVI+S D VTTKLL+KLQNGAFVEAVIMRYDTRL             STLCISSQVG
Sbjct: 65   SVDSVINSNDGVTTKLLVKLQNGAFVEAVIMRYDTRLGKYCGKPRPGGPRSTLCISSQVG 124

Query: 426  CKMGCKFCATGSMGFKSNLSTGEIVEQLVHASRLSPIRNVVFMGMGEPLNNYTALVEAIR 605
            CKMGCKFCATGSMGFK+NLS+GEIVEQLVHAS LS IRNVVFMGMGEPLNNY+ALVEA+R
Sbjct: 125  CKMGCKFCATGSMGFKNNLSSGEIVEQLVHASCLSQIRNVVFMGMGEPLNNYSALVEAVR 184

Query: 606  VMTASPFQVSPKKITVSTVGIIHAIKKFHGDLPNLNLAVSLHAPVQDIRCQIMPAARAFP 785
             M+  PFQ+SPK+ITVSTVGIIHAI K H DLP LNLAVSLHAPVQD+RCQIMPAARAFP
Sbjct: 185  AMSGVPFQLSPKRITVSTVGIIHAINKLHKDLPGLNLAVSLHAPVQDVRCQIMPAARAFP 244

Query: 786  LERLMDALAEYQKKSQQKIFIEYIMLDGVNDEEQHAHQLGRLLETFEVVVNLIPFNPIGA 965
            LE+LMDAL  YQK S QKIFIEYIMLDGVNDEEQHAHQLG+LLETF+VVVNLIPFNPIG+
Sbjct: 245  LEKLMDALQVYQKNSMQKIFIEYIMLDGVNDEEQHAHQLGKLLETFDVVVNLIPFNPIGS 304

Query: 966  PSQFGTSGDQRVTRFQTILRSTYNIRTTVRKQMGQDISGACGQLVIDLSSKKSEGVASLT 1145
             SQF TS +++V RFQ ILR   NIRTTVRKQMGQDISGACGQLV++L  +K      +T
Sbjct: 305  LSQFRTSSEEKVLRFQKILRGVNNIRTTVRKQMGQDISGACGQLVVNLPDEKKPPNLGVT 364

Query: 1146 DIEDL 1160
            DIEDL
Sbjct: 365  DIEDL 369


>ref|XP_002265287.1| PREDICTED: ribosomal RNA large subunit methyltransferase N [Vitis
            vinifera] gi|147817733|emb|CAN60150.1| hypothetical
            protein VITISV_044331 [Vitis vinifera]
            gi|296083052|emb|CBI22456.3| unnamed protein product
            [Vitis vinifera]
          Length = 372

 Score =  550 bits (1417), Expect = e-154
 Identities = 281/372 (75%), Positives = 305/372 (81%), Gaps = 1/372 (0%)
 Frame = +3

Query: 54   MTFRSVFDAAFIRTEFDKLGINTHFIPSIWKYVIQNPNCEWREIPSLPSAVYSLLSSKFK 233
            M   S+FD   +R +F   GI+ +FIP IWKYV+QNPNC+W +I SLPSA Y LL S FK
Sbjct: 1    MAISSIFDGGELRRQFHSAGISPNFIPFIWKYVVQNPNCDWDDITSLPSAAYPLLRSHFK 60

Query: 234  PCTSIVDSVIDSTDQVTTKLLIKLQNGAFVEAVIMRYDTRLXXXXXXXXXXXXXSTLCIS 413
            P TS + +VIDS+D VTTKLLIKLQNG+FVEAVIMRYDTRL             STLCIS
Sbjct: 61   PSTSSLHTVIDSSDNVTTKLLIKLQNGSFVEAVIMRYDTRLGKYGGKPRPGGPRSTLCIS 120

Query: 414  SQVGCKMGCKFCATGSMGFKSNLSTGEIVEQLVHASRLSPIRNVVFMGMGEPLNNYTALV 593
            SQVGCKMGCKFCATGSMGFKSNLS+GEIVEQLVHAS  S IRNVVFMGMGEPLNNY+ALV
Sbjct: 121  SQVGCKMGCKFCATGSMGFKSNLSSGEIVEQLVHASHFSQIRNVVFMGMGEPLNNYSALV 180

Query: 594  EAIRVMTASPFQVSPKKITVSTVGIIHAIKKFHGDLPNLNLAVSLHAPVQDIRCQIMPAA 773
            EAI +M  SPFQ+SPKKITVSTVGIIHAI K   DLPNLNLAVSLHAPVQDIRCQIMPAA
Sbjct: 181  EAIHIMQGSPFQLSPKKITVSTVGIIHAINKLQSDLPNLNLAVSLHAPVQDIRCQIMPAA 240

Query: 774  RAFPLERLMDALAEYQKKSQQKIFIEYIMLDGVNDEEQHAHQLGRLLETFEVVVNLIPFN 953
            RAFPLE+LMD L  YQ  S QKIFIEYIMLD VNDEEQHAHQLG+LLETF+VVVNLIPFN
Sbjct: 241  RAFPLEKLMDTLRTYQTNSGQKIFIEYIMLDEVNDEEQHAHQLGKLLETFQVVVNLIPFN 300

Query: 954  PIGAPSQFGTSGDQRVTRFQTILRSTYNIRTTVRKQMGQDISGACGQLVIDLSSKKSEGV 1133
            PIG  S F TS +Q+V RFQ ILR TYNIRTTVRKQMGQDISGACGQLV++   K+S G 
Sbjct: 301  PIGNLSYFKTSSEQKVARFQKILRGTYNIRTTVRKQMGQDISGACGQLVVNQPDKRSTGS 360

Query: 1134 AS-LTDIEDLHL 1166
            A  LTDIEDLHL
Sbjct: 361  AGLLTDIEDLHL 372


>ref|XP_004136937.1| PREDICTED: dual-specificity RNA methyltransferase RlmN 1-like
            [Cucumis sativus] gi|449495695|ref|XP_004159917.1|
            PREDICTED: dual-specificity RNA methyltransferase RlmN
            1-like [Cucumis sativus]
          Length = 384

 Score =  545 bits (1403), Expect = e-152
 Identities = 276/381 (72%), Positives = 315/381 (82%), Gaps = 12/381 (3%)
 Frame = +3

Query: 60   FRSVFDAAFIRTEFDKLGINTHFIPSIWKYVIQNPN----------CEWREI-PSLPSAV 206
            FRS FDA  +RTEF+K GI T FIP IWK+++ +PN           +W ++ PSLPSA 
Sbjct: 4    FRSAFDAGELRTEFEKAGIKTTFIPFIWKHLLHDPNNIFNHNLASEFQWEQVVPSLPSAA 63

Query: 207  YSLLSSKFKPCTSIVDSVIDSTDQVTTKLLIKLQNGAFVEAVIMRYDTRLXXXXXXXXXX 386
            YSLL  KFKP TS V SV+DS+DQVTTKLLIKLQ+GAFVEAVIMRYDTRL          
Sbjct: 64   YSLLRLKFKPLTSTVHSVVDSSDQVTTKLLIKLQSGAFVEAVIMRYDTRLGKYGGKPRPG 123

Query: 387  XXXSTLCISSQVGCKMGCKFCATGSMGFKSNLSTGEIVEQLVHASRLSPIRNVVFMGMGE 566
               STLCISSQVGCKMGC+FCATG+MGFKSNL++GEIVEQLVHASR S IRN+VFMGMGE
Sbjct: 124  GLRSTLCISSQVGCKMGCRFCATGTMGFKSNLTSGEIVEQLVHASRFSQIRNIVFMGMGE 183

Query: 567  PLNNYTALVEAIRVMTASPFQVSPKKITVSTVGIIHAIKKFHGDLPNLNLAVSLHAPVQD 746
            PLNNY++LVEA+R M A PF +SPK+IT+STVGIIHAI K H DLP LNLAVSLHAPVQD
Sbjct: 184  PLNNYSSLVEAVRAMMAPPFLLSPKRITISTVGIIHAINKLHSDLPGLNLAVSLHAPVQD 243

Query: 747  IRCQIMPAARAFPLERLMDALAEYQKKSQQKIFIEYIMLDGVNDEEQHAHQLGRLLETFE 926
            IRCQIMPAARAFPL++LMDAL EYQKKSQQKI IEYIMLDGVNDEEQHAHQLG+LLETF+
Sbjct: 244  IRCQIMPAARAFPLQKLMDALQEYQKKSQQKILIEYIMLDGVNDEEQHAHQLGKLLETFQ 303

Query: 927  VVVNLIPFNPIGAPSQFGTSGDQRVTRFQTILRSTYNIRTTVRKQMGQDISGACGQLVID 1106
            V+VNLIPFNPIG+ SQF TS D++V+ FQ +LR TYNIRTT+RKQMGQDISGACGQLV+ 
Sbjct: 304  VIVNLIPFNPIGSSSQFKTSSDEKVSVFQQVLRGTYNIRTTIRKQMGQDISGACGQLVVS 363

Query: 1107 LSSKKSEGVASLT-DIEDLHL 1166
            L ++ S   +S+  DIEDLHL
Sbjct: 364  LPNRSSSKQSSVVPDIEDLHL 384


>ref|NP_188597.1| radical SAM domain-containing protein [Arabidopsis thaliana]
            gi|28393068|gb|AAO41968.1| unknown protein [Arabidopsis
            thaliana] gi|28827394|gb|AAO50541.1| unknown protein
            [Arabidopsis thaliana] gi|332642748|gb|AEE76269.1|
            radical SAM domain-containing protein [Arabidopsis
            thaliana]
          Length = 372

 Score =  526 bits (1355), Expect = e-147
 Identities = 264/372 (70%), Positives = 304/372 (81%), Gaps = 1/372 (0%)
 Frame = +3

Query: 54   MTFRSVFDAAFIRTEFDKLGINTHFIPSIWKYVIQNPNCEWREIPSLPSAVYSLLSSKFK 233
            M  +SVFDA+ I++EF+  GIN  F   IWKYVIQNP+C W EIPSLPSA YSLL SKFK
Sbjct: 1    MKLKSVFDASEIKSEFESAGINPKFAIQIWKYVIQNPDCVWDEIPSLPSAAYSLLHSKFK 60

Query: 234  PCTSIVDSVIDSTDQVTTKLLIKLQNGAFVEAVIMRYDTRLXXXXXXXXXXXXXSTLCIS 413
              TS + S+  S+D  T+KLLIKLQNGAFVEAV+MRYDTRL             STLCIS
Sbjct: 61   TLTSSLHSLFHSSDGTTSKLLIKLQNGAFVEAVVMRYDTRLGMLGGKPRPGGIRSTLCIS 120

Query: 414  SQVGCKMGCKFCATGSMGFKSNLSTGEIVEQLVHASRLSPIRNVVFMGMGEPLNNYTALV 593
            SQVGCKMGC FCATG+MGFKSNL++GEIVEQLVHASR++ IRN+VFMGMGEPLNNY A+V
Sbjct: 121  SQVGCKMGCTFCATGTMGFKSNLTSGEIVEQLVHASRIADIRNIVFMGMGEPLNNYNAVV 180

Query: 594  EAIRVMTASPFQVSPKKITVSTVGIIHAIKKFHGDLPNLNLAVSLHAPVQDIRCQIMPAA 773
            EA+RVM   PFQ+SPK+IT+STVGI+HAI K H DLP ++LAVSLHAPVQ+IRCQIMPAA
Sbjct: 181  EAVRVMLNQPFQLSPKRITISTVGIVHAINKLHNDLPGVSLAVSLHAPVQEIRCQIMPAA 240

Query: 774  RAFPLERLMDALAEYQKKSQQKIFIEYIMLDGVNDEEQHAHQLGRLLETFEVVVNLIPFN 953
            RAFPL++LMDAL  +QK SQQKIFIEYIMLDGVND+EQHAH LG LL+TF+VV+NLIPFN
Sbjct: 241  RAFPLQKLMDALQTFQKNSQQKIFIEYIMLDGVNDQEQHAHLLGELLKTFQVVINLIPFN 300

Query: 954  PIGAPSQFGTSGDQRVTRFQTILRSTYNIRTTVRKQMGQDISGACGQLVIDLSS-KKSEG 1130
            PIG+ SQF TS  Q V+RFQ ILR TY IRTT+RK+MGQDISGACGQLV++    KK+ G
Sbjct: 301  PIGSTSQFETSSIQGVSRFQKILRETYKIRTTIRKEMGQDISGACGQLVVNQPDIKKTPG 360

Query: 1131 VASLTDIEDLHL 1166
               L DIEDL L
Sbjct: 361  TVELRDIEDLLL 372


>ref|XP_003558557.1| PREDICTED: ribosomal RNA large subunit methyltransferase N 2-like
            [Brachypodium distachyon]
          Length = 382

 Score =  520 bits (1340), Expect = e-145
 Identities = 260/370 (70%), Positives = 306/370 (82%), Gaps = 2/370 (0%)
 Frame = +3

Query: 63   RSVFDAAFIRTEFDKLGINTHFIPSIWKYVIQNPNC-EWREIPSLPSAVYSLLSSKFKPC 239
            RSVFDAA+IR EFD  GI+ HFIP IWKYV+QNP C +   +PSLP+A Y+LL +KF+P 
Sbjct: 13   RSVFDAAYIRAEFDGAGISPHFIPLIWKYVLQNPRCGDLDGVPSLPAAAYALLRNKFRPT 72

Query: 240  TSIVDSVIDSTDQVTTKLLIKLQNGAFVEAVIMRYDTRLXXXXXXXXXXXXXSTLCISSQ 419
            TS + +  +S D+ TTKLLI+LQNG  VEAV+MRYDTRL             STLC+SSQ
Sbjct: 73   TSTLTAAAESKDRTTTKLLIRLQNGESVEAVVMRYDTRLGKYDGKPRPGGVRSTLCVSSQ 132

Query: 420  VGCKMGCKFCATGSMGFKSNLSTGEIVEQLVHASRLSPIRNVVFMGMGEPLNNYTALVEA 599
            VGCKMGC+FCATG+MGFKSNLS+GEIVEQLVHASR S IRNVVFMGMGEPLNNYTA+VEA
Sbjct: 133  VGCKMGCRFCATGTMGFKSNLSSGEIVEQLVHASRYSQIRNVVFMGMGEPLNNYTAVVEA 192

Query: 600  IRVMTASPFQVSPKKITVSTVGIIHAIKKFHGDLPNLNLAVSLHAPVQDIRCQIMPAARA 779
            I V+T  PFQ+SPK+ITVSTVGIIH+I KF+ DLPN+NLAVSLHAP QDIRCQIMPAARA
Sbjct: 193  IHVLTGPPFQLSPKRITVSTVGIIHSINKFNNDLPNINLAVSLHAPDQDIRCQIMPAARA 252

Query: 780  FPLERLMDALAEYQKKSQQKIFIEYIMLDGVNDEEQHAHQLGRLLETFEVVVNLIPFNPI 959
            FPL +LM+AL  YQ +S+Q IFIEYIMLDGVND+EQHAHQLG+LLETF+ VVNLIPFNPI
Sbjct: 253  FPLGKLMNALQSYQNESKQTIFIEYIMLDGVNDQEQHAHQLGKLLETFKAVVNLIPFNPI 312

Query: 960  GAPSQFGTSGDQRVTRFQTILRSTYNIRTTVRKQMGQDISGACGQLVIDLSSKKSEGVAS 1139
            G+ S F TS DQ V +FQ +LR  Y+IRTTVR++MGQDI+GACGQLV+ L  ++S G A+
Sbjct: 313  GSSSNFKTSSDQSVKKFQKVLRGVYSIRTTVRQEMGQDIAGACGQLVVSLPDERSAGGAT 372

Query: 1140 -LTDIEDLHL 1166
             L+DIEDL +
Sbjct: 373  LLSDIEDLRI 382