BLASTX nr result

ID: Atractylodes21_contig00034788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034788
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB75932.1| putative protein [Arabidopsis thaliana]                77   2e-19
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]    82   3e-18
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]    81   4e-17
emb|CAN78427.1| hypothetical protein VITISV_001243 [Vitis vinifera]    76   1e-16
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                    76   1e-16

>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score = 77.0 bits (188), Expect(3) = 2e-19
 Identities = 35/61 (57%), Positives = 46/61 (75%)
 Frame = +3

Query: 3   IMEMVRCLLNEKRMPKVYWGEAANWAVHILNRSPTSALENMTPYEC*SGGKPNVEQDKVF 182
           IM  VR +L+E+++PK++W EA  W+VHI NRSPT+A+E MTP E  SG KP VE  +VF
Sbjct: 606 IMNAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWSGRKPVVEYFRVF 665

Query: 183 G 185
           G
Sbjct: 666 G 666



 Score = 40.4 bits (93), Expect(3) = 2e-19
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +1

Query: 187 IGHVHIPTQKREKVDDKSHKCV 252
           IG+VHIP QKR K+DDKS KCV
Sbjct: 668 IGYVHIPDQKRSKLDDKSKKCV 689



 Score = 22.7 bits (47), Expect(3) = 2e-19
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +2

Query: 248 VFLGVSEESK 277
           VFLGVSEESK
Sbjct: 689 VFLGVSEESK 698


>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score = 81.6 bits (200), Expect(2) = 3e-18
 Identities = 36/61 (59%), Positives = 47/61 (77%)
 Frame = +3

Query: 3   IMEMVRCLLNEKRMPKVYWGEAANWAVHILNRSPTSALENMTPYEC*SGGKPNVEQDKVF 182
           IM MVR +++EK++PK +W EA NW VH+LNRSPT A++N TP E  SG KP+VE  +VF
Sbjct: 583 IMNMVRSMISEKKIPKPFWPEAVNWTVHVLNRSPTLAVQNKTPXEAWSGVKPSVEHFRVF 642

Query: 183 G 185
           G
Sbjct: 643 G 643



 Score = 35.0 bits (79), Expect(2) = 3e-18
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = +1

Query: 187 IGHVHIPTQKREKVDDKSHKCV 252
           I HVH+P  KR K+DDKS  CV
Sbjct: 645 ISHVHVPDNKRTKLDDKSLSCV 666


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score = 80.9 bits (198), Expect(2) = 4e-17
 Identities = 35/61 (57%), Positives = 47/61 (77%)
 Frame = +3

Query: 3   IMEMVRCLLNEKRMPKVYWGEAANWAVHILNRSPTSALENMTPYEC*SGGKPNVEQDKVF 182
           IM MVR +L+EK++PK +W EA NW VH+LNRSPT A++N TP E  SG KP+V+  ++F
Sbjct: 358 IMNMVRSMLSEKQIPKTFWPEAVNWTVHVLNRSPTLAVKNKTPEEAWSGRKPSVDHFRIF 417

Query: 183 G 185
           G
Sbjct: 418 G 418



 Score = 32.0 bits (71), Expect(2) = 4e-17
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 187 IGHVHIPTQKREKVDDKSHKCV 252
           I HVH+P  KR K+D KS +C+
Sbjct: 420 ISHVHVPDHKRVKLDAKSLRCI 441


>emb|CAN78427.1| hypothetical protein VITISV_001243 [Vitis vinifera]
          Length = 1770

 Score = 76.3 bits (186), Expect(3) = 1e-16
 Identities = 34/61 (55%), Positives = 45/61 (73%)
 Frame = +3

Query: 3    IMEMVRCLLNEKRMPKVYWGEAANWAVHILNRSPTSALENMTPYEC*SGGKPNVEQDKVF 182
            IM MV+ +L++K+ PK +W EA NW VHILNR PT  ++NMTP E  SG KP++E  +VF
Sbjct: 1157 IMNMVQSMLSKKKRPKTFWPEAVNWIVHILNRCPTLPVKNMTPEETWSGVKPSIEHFRVF 1216

Query: 183  G 185
            G
Sbjct: 1217 G 1217



 Score = 32.7 bits (73), Expect(3) = 1e-16
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +1

Query: 187  IGHVHIPTQKREKVDDKSHKCV 252
            I HVH+P  KR K++DKS  CV
Sbjct: 1219 ISHVHVPDIKRTKLEDKSFTCV 1240



 Score = 21.9 bits (45), Expect(3) = 1e-16
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = +2

Query: 242  TSVFLGVSEESK 277
            T V LGVSEESK
Sbjct: 1238 TCVLLGVSEESK 1249


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score = 76.3 bits (186), Expect(2) = 1e-16
 Identities = 34/61 (55%), Positives = 45/61 (73%)
 Frame = +3

Query: 3   IMEMVRCLLNEKRMPKVYWGEAANWAVHILNRSPTSALENMTPYEC*SGGKPNVEQDKVF 182
           IM +VR +L+EKR+PK YW EA  W  H+LNRSPT  ++++TP E  SG KPNV+  +VF
Sbjct: 473 IMNLVRSVLSEKRVPKSYWPEAVKWITHVLNRSPTLVVQDVTPEEAWSGIKPNVDYFRVF 532

Query: 183 G 185
           G
Sbjct: 533 G 533



 Score = 34.7 bits (78), Expect(2) = 1e-16
 Identities = 15/22 (68%), Positives = 15/22 (68%)
 Frame = +1

Query: 187 IGHVHIPTQKREKVDDKSHKCV 252
           I H HIP  KR K DDKS KCV
Sbjct: 535 IAHAHIPDAKRTKFDDKSCKCV 556


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