BLASTX nr result

ID: Atractylodes21_contig00034780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034780
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304436.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-28
ref|XP_002267457.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mit...    94   5e-28
ref|XP_003608810.1| Immature colon carcinoma transcript 1 protei...    91   6e-28
ref|XP_002329853.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-27
ref|XP_004147947.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mit...    97   1e-27

>ref|XP_002304436.1| predicted protein [Populus trichocarpa] gi|222841868|gb|EEE79415.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score = 94.4 bits (233), Expect(2) = 3e-28
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = +2

Query: 446 SFARSGGPGGQNVNKVNTKVDMRFNIKEAYWLSERVKEKILQRENNRINK 595
           SFARSGGPGGQNVNKVNTKVDMRFN+K AYWLSER++E+I+Q E NRINK
Sbjct: 101 SFARSGGPGGQNVNKVNTKVDMRFNVKNAYWLSERIRERIMQMEKNRINK 150



 Score = 56.6 bits (135), Expect(2) = 3e-28
 Identities = 31/44 (70%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
 Frame = +1

Query: 235 KPSARMSLVHQLLHEAKER-SAGRDEPIPKITLDHVSVSFARSG 363
           K S+R+S V QLL EA+ER SA  +EP PKITLDHV+VSFARSG
Sbjct: 63  KVSSRLSQVQQLLQEAEERASAAGNEPPPKITLDHVTVSFARSG 106


>ref|XP_002267457.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial [Vitis
           vinifera] gi|296082846|emb|CBI22147.3| unnamed protein
           product [Vitis vinifera]
          Length = 230

 Score = 93.6 bits (231), Expect(2) = 5e-28
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = +2

Query: 446 SFARSGGPGGQNVNKVNTKVDMRFNIKEAYWLSERVKEKILQRENNRINK 595
           SFARSGGPGGQNVNKVNTKVDMRFN+K AYWLS+RV+E+I+Q E NRINK
Sbjct: 102 SFARSGGPGGQNVNKVNTKVDMRFNVKNAYWLSDRVRERIMQMEKNRINK 151



 Score = 56.6 bits (135), Expect(2) = 5e-28
 Identities = 31/44 (70%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
 Frame = +1

Query: 235 KPSARMSLVHQLLHEAKERSAG-RDEPIPKITLDHVSVSFARSG 363
           K SAR+S V QLL EA+ERS    +EP PKITLDHV+VSFARSG
Sbjct: 64  KVSARLSQVQQLLQEAEERSLSFGNEPTPKITLDHVTVSFARSG 107


>ref|XP_003608810.1| Immature colon carcinoma transcript 1 protein [Medicago truncatula]
           gi|355509865|gb|AES91007.1| Immature colon carcinoma
           transcript 1 protein [Medicago truncatula]
          Length = 232

 Score = 90.5 bits (223), Expect(2) = 6e-28
 Identities = 41/50 (82%), Positives = 47/50 (94%)
 Frame = +2

Query: 446 SFARSGGPGGQNVNKVNTKVDMRFNIKEAYWLSERVKEKILQRENNRINK 595
           SFARSGGPGGQNVNKVNTKVDMRFN+ +A+WLSERV+EKI+Q E NR+NK
Sbjct: 104 SFARSGGPGGQNVNKVNTKVDMRFNVGKAHWLSERVREKIMQMEKNRMNK 153



 Score = 59.3 bits (142), Expect(2) = 6e-28
 Identities = 31/46 (67%), Positives = 36/46 (78%), Gaps = 2/46 (4%)
 Frame = +1

Query: 232 NKPSARMSLVHQLLHEAKERSAGRD--EPIPKITLDHVSVSFARSG 363
           NK S+R+S VH+LL EA+ RS   D   PIPKITLDHV+VSFARSG
Sbjct: 64  NKVSSRLSQVHELLQEAEHRSLSADYNAPIPKITLDHVTVSFARSG 109


>ref|XP_002329853.1| predicted protein [Populus trichocarpa] gi|222871090|gb|EEF08221.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score = 93.6 bits (231), Expect(2) = 1e-27
 Identities = 41/50 (82%), Positives = 48/50 (96%)
 Frame = +2

Query: 446 SFARSGGPGGQNVNKVNTKVDMRFNIKEAYWLSERVKEKILQRENNRINK 595
           SFARSGGPGGQNVNKVNTKVDMRFN+K+AYWLS+R++E+I+Q E NRINK
Sbjct: 98  SFARSGGPGGQNVNKVNTKVDMRFNVKKAYWLSDRIRERIMQMEKNRINK 147



 Score = 55.5 bits (132), Expect(2) = 1e-27
 Identities = 31/44 (70%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
 Frame = +1

Query: 235 KPSARMSLVHQLLHEAKER-SAGRDEPIPKITLDHVSVSFARSG 363
           K SAR+S VHQLL EA+ER SA  +EP PKIT  HV+VSFARSG
Sbjct: 60  KVSARLSQVHQLLQEAEERASAVGNEPTPKITRGHVTVSFARSG 103


>ref|XP_004147947.1| PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial-like
           [Cucumis sativus]
          Length = 235

 Score = 97.1 bits (240), Expect(2) = 1e-27
 Identities = 44/50 (88%), Positives = 48/50 (96%)
 Frame = +2

Query: 446 SFARSGGPGGQNVNKVNTKVDMRFNIKEAYWLSERVKEKILQRENNRINK 595
           +FARSGGPGGQNVNKVNTKVDMRFN+KEAYWLSER++EKILQ E NRINK
Sbjct: 107 NFARSGGPGGQNVNKVNTKVDMRFNVKEAYWLSERIREKILQTEKNRINK 156



 Score = 51.6 bits (122), Expect(2) = 1e-27
 Identities = 29/44 (65%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = +1

Query: 235 KPSARMSLVHQLLHEAKERSAGRD-EPIPKITLDHVSVSFARSG 363
           K S+RMS + QLL EA+ER+   D EP PKITLDHV V+FARSG
Sbjct: 69  KVSSRMSQMQQLLLEAEERALLADTEPAPKITLDHVIVNFARSG 112


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