BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034731
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    84   2e-14
ref|NP_001174325.1| Os05g0293200 [Oryza sativa Japonica Group] g...    84   3e-14
ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana] ...    80   3e-13
gb|AAX95825.1| retrotransposon protein, putative, unclassified [...    79   5e-13
gb|ABA94767.2| retrotransposon protein, putative, unclassified [...    78   1e-12

>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
 Frame = +2

Query: 227 PPTTSADKLIPFS-ITNKVPVKLDLEKHNYTSWSSFFKIHLGSLGLKSHVEEEA-SPSTI 400
           PP++S +KL   + I   +P+ LD+    Y  W   F+ H  S G+  H++    S   I
Sbjct: 3   PPSSSNEKLYGITQIKAYIPILLDMANLYYNLWRELFETHCVSFGVLGHLDGSTKSTPEI 62

Query: 401 NPEWCKLDDLIKMWILGSLCDSLQEQVVSTPGNAKALWXXXXXXXXXXXXARAINLDNEL 580
             EW + D  +KMWI G++ +S+ + V+     A+ LW            ARA+ L+NEL
Sbjct: 63  AKEWKERDGHVKMWIYGTISESIIDTVLKKNSTARELWLAIETLFLDNKEARALQLENEL 122

Query: 581 RSIKIGKMSINEYC 622
           R++ IG +S+++YC
Sbjct: 123 RTMVIGDLSVHDYC 136


>ref|NP_001174325.1| Os05g0293200 [Oryza sativa Japonica Group]
           gi|255676213|dbj|BAH93053.1| Os05g0293200 [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
 Frame = +2

Query: 179 LLPIKIINMTGADMPPPP------TTSADKLIPFSITNK---VPVKLDLEKHNYTSWSSF 331
           LL    +  T    PPPP      T SA      S+ N    VPV LDL   NYT W   
Sbjct: 123 LLAQLAVRPTSPPAPPPPLTLDHETVSALPTQAVSVLNVKALVPVTLDLTTGNYTRWRGL 182

Query: 332 FKIHLGSLGLKSHVEEEASPSTINPEWCKLDDLIKMWILGSLCDSLQEQVVSTPGNAKAL 511
           F + LG   L  HV  +  P+   P+W ++D ++  W+ G++   L ++V+S    A+++
Sbjct: 183 FLVVLGKYALTDHVVLDTPPAN-QPDWMQMDCVVLGWLYGTISADLLQEVMSATATARSV 241

Query: 512 WXXXXXXXXXXXXARAINLDNELRSIKIGKMSINEYC 622
           W             RAINL+ E R+   G ++I +YC
Sbjct: 242 WRDLAHQFLGNQERRAINLNAEFRNFTQGDLNITDYC 278


>ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177756|dbj|BAB11069.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008231|gb|AED95614.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 369

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
 Frame = +2

Query: 284 VKLDLEKHNYTSWSSFFKIHLGSLGLKSHVEEEASPSTINPE-WCKLDDLIKMWILGSLC 460
           V LDL K NY  W   F+    S G+  H++  ++P+ +  + W + D L+KMWI G++ 
Sbjct: 24  VTLDLNKLNYDVWRELFETLCLSFGVLGHIDGSSTPTPMTEKRWKERDGLVKMWIYGTIT 83

Query: 461 DSLQEQVVSTPGNAKALWXXXXXXXXXXXXARAINLDNELRSIKIGKMSINEYC 622
           DSL + ++     A+ LW            ARA+  +NELR+  I  +S++EYC
Sbjct: 84  DSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTTTIDDLSVHEYC 137


>gb|AAX95825.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|77550350|gb|ABA93147.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 320

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 47/158 (29%), Positives = 71/158 (44%)
 Frame = +2

Query: 149 QSLPPKNTVPLLPIKIINMTGADMPPPPTTSADKLIPFSITNKVPVKLDLEKHNYTSWSS 328
           Q LPP ++ P  P  ++     D     T     +   +I   +PV LDL   NYT W  
Sbjct: 117 QVLPPSSSTPPAPPLVL-----DAETLATLHQQAIAVLNIKALIPVTLDLATANYTRWRG 171

Query: 329 FFKIHLGSLGLKSHVEEEASPSTINPEWCKLDDLIKMWILGSLCDSLQEQVVSTPGNAKA 508
            F + LG   L  HV  +  PS  +P+W ++D ++  W+ G++   L ++V+S    A  
Sbjct: 172 MFLVVLGKYALTDHVLSDDPPS--HPDWAQMDCVVLTWLYGTISSDLFQEVLSPTSTAPI 229

Query: 509 LWXXXXXXXXXXXXARAINLDNELRSIKIGKMSINEYC 622
           +W             RAINL  E  +   G MS  +YC
Sbjct: 230 VWRNLEHQFLGNSELRAINLTAEFYTFVQGDMSGADYC 267


>gb|ABA94767.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 2446

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
 Frame = +2

Query: 233 TTSADKLIPFS---ITNKVPVKLDLEKHNYTSWSSFFKIHLGSLGLKSHVEEEASPSTIN 403
           +T+++ L P++   + + VP+ L+    NY  W +FF    G  GL +H++  A P   N
Sbjct: 21  STTSEFLHPYATVAVKSHVPITLENTHPNYNKWRAFFTSLCGKFGLMAHIDGSAPPRPNN 80

Query: 404 PEWCKLDDLIKMWILGSLCDSLQEQVVSTPGNAKALWXXXXXXXXXXXXARAINLDNELR 583
           P W + D  I+ WI GS+ D++ +  +     A+ LW             RAI L ++  
Sbjct: 81  PAWEQADCCIRSWIFGSVADNILDLAMEPDQTARELWVTITDMFHANKEPRAIFLSHQFH 140

Query: 584 SIKIGKMSINEYC 622
           S+  G  SI++YC
Sbjct: 141 SMIQGDSSIDDYC 153