BLASTX nr result

ID: Atractylodes21_contig00034728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034728
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat...   156   1e-36
ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arab...   156   1e-36
emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]   156   1e-36
ref|NP_001190038.1| tetratricopeptide repeat-like family protein...   154   9e-36
emb|CAB61996.1| putative protein [Arabidopsis thaliana]               154   9e-36

>ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  156 bits (395), Expect = 1e-36
 Identities = 70/98 (71%), Positives = 89/98 (90%)
 Frame = -2

Query: 294 LGRSGRINEAYDFVRKMKTKPNDKIWGALLSACKVHSNMDIGLVAADHLFQLVPEQAGYY 115
           LGR+G+++EAY F+++M  +PN+++WGALLSAC+V+SNM IGL+AAD LFQL PEQ+GYY
Sbjct: 453 LGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYY 512

Query: 114 VLLSNIYAKAGRWKDVTNIRSIMKAKGVKKVPGVSNVE 1
           VLLSNIYAKAGRW+DVT +RSIMK KG+KK+PGVSN E
Sbjct: 513 VLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFE 550


>ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata] gi|297323489|gb|EFH53910.1| hypothetical protein
           ARALYDRAFT_485272 [Arabidopsis lyrata subsp. lyrata]
          Length = 1217

 Score =  156 bits (395), Expect = 1e-36
 Identities = 70/98 (71%), Positives = 88/98 (89%)
 Frame = -2

Query: 294 LGRSGRINEAYDFVRKMKTKPNDKIWGALLSACKVHSNMDIGLVAADHLFQLVPEQAGYY 115
           LGR+G++ EAY F+++M  +PN+++WGALL AC+VHSN DIGL+AAD LFQL PEQ+GYY
Sbjct: 457 LGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYY 516

Query: 114 VLLSNIYAKAGRWKDVTNIRSIMKAKGVKKVPGVSNVE 1
           VLLSNIYAKAGRW++VTNIR+IMK+KG+KK PG SNVE
Sbjct: 517 VLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVE 554


>emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  156 bits (395), Expect = 1e-36
 Identities = 70/98 (71%), Positives = 89/98 (90%)
 Frame = -2

Query: 294  LGRSGRINEAYDFVRKMKTKPNDKIWGALLSACKVHSNMDIGLVAADHLFQLVPEQAGYY 115
            LGR+G+++EAY F+++M  +PN+++WGALLSAC+V+SNM IGL+AAD LFQL PEQ+GYY
Sbjct: 1442 LGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYY 1501

Query: 114  VLLSNIYAKAGRWKDVTNIRSIMKAKGVKKVPGVSNVE 1
            VLLSNIYAKAGRW+DVT +RSIMK KG+KK+PGVSN E
Sbjct: 1502 VLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFE 1539


>ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
           gi|218546754|sp|P0C899.1|PP271_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g49142 gi|332644983|gb|AEE78504.1|
           tetratricopeptide repeat-like family protein
           [Arabidopsis thaliana]
          Length = 686

 Score =  154 bits (388), Expect = 9e-36
 Identities = 69/98 (70%), Positives = 87/98 (88%)
 Frame = -2

Query: 294 LGRSGRINEAYDFVRKMKTKPNDKIWGALLSACKVHSNMDIGLVAADHLFQLVPEQAGYY 115
           LGR+G++ EAY F++ M  +PN+++WGALL AC+VHS+ DIGL+AAD LFQL PEQ+GYY
Sbjct: 456 LGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYY 515

Query: 114 VLLSNIYAKAGRWKDVTNIRSIMKAKGVKKVPGVSNVE 1
           VLLSNIYAKAGRW++VTNIR+IMK+KG+KK PG SNVE
Sbjct: 516 VLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVE 553


>emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  154 bits (388), Expect = 9e-36
 Identities = 69/98 (70%), Positives = 87/98 (88%)
 Frame = -2

Query: 294 LGRSGRINEAYDFVRKMKTKPNDKIWGALLSACKVHSNMDIGLVAADHLFQLVPEQAGYY 115
           LGR+G++ EAY F++ M  +PN+++WGALL AC+VHS+ DIGL+AAD LFQL PEQ+GYY
Sbjct: 456 LGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYY 515

Query: 114 VLLSNIYAKAGRWKDVTNIRSIMKAKGVKKVPGVSNVE 1
           VLLSNIYAKAGRW++VTNIR+IMK+KG+KK PG SNVE
Sbjct: 516 VLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVE 553


Top