BLASTX nr result

ID: Atractylodes21_contig00034716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034716
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72925.1| hypothetical protein VITISV_027143 [Vitis vinifera]    60   1e-07
ref|XP_003624006.1| TMV resistance protein N [Medicago truncatul...    58   9e-07
ref|XP_003627638.1| Tir-nbs-lrr resistance protein [Medicago tru...    58   9e-07
ref|XP_002523481.1| TMV resistance protein N, putative [Ricinus ...    58   9e-07
ref|XP_002276075.2| PREDICTED: TMV resistance protein N-like [Vi...    57   1e-06

>emb|CAN72925.1| hypothetical protein VITISV_027143 [Vitis vinifera]
          Length = 726

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/70 (44%), Positives = 45/70 (64%)
 Frame = -1

Query: 214 FRSKIPMDGYNELAKEALQYCQGNPLALEVLASFLSEGNSVKFWRSTLDLLKRDFSPRIQ 35
           FRS +P D +  L+ +A+QYC+G PLAL VL SFL  G +++ W S L  L+++    IQ
Sbjct: 58  FRSNLPKDDFENLSHQAVQYCEGLPLALRVLGSFL-YGKTIREWESELHKLEKEPEVEIQ 116

Query: 34  RVLIRSYNSL 5
            VL  S++ L
Sbjct: 117 NVLKISFDGL 126


>ref|XP_003624006.1| TMV resistance protein N [Medicago truncatula]
           gi|87162908|gb|ABD28703.1| TIR [Medicago truncatula]
           gi|355499021|gb|AES80224.1| TMV resistance protein N
           [Medicago truncatula]
          Length = 1134

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/70 (44%), Positives = 43/70 (61%)
 Frame = -1

Query: 214 FRSKIPMDGYNELAKEALQYCQGNPLALEVLASFLSEGNSVKFWRSTLDLLKRDFSPRIQ 35
           F+   P +GY +L+KE + YC G PLALEVL S+L  G ++  W S +  L+    PR+Q
Sbjct: 366 FKGDKPQEGYLDLSKEVVDYCGGLPLALEVLGSYL-YGRNIDVWHSAVKKLRSFPHPRVQ 424

Query: 34  RVLIRSYNSL 5
             L  SY+SL
Sbjct: 425 DNLKISYDSL 434


>ref|XP_003627638.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
           gi|355521660|gb|AET02114.1| Tir-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 1184

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/70 (44%), Positives = 43/70 (61%)
 Frame = -1

Query: 214 FRSKIPMDGYNELAKEALQYCQGNPLALEVLASFLSEGNSVKFWRSTLDLLKRDFSPRIQ 35
           F   +P +GY E++   + Y +GNPLAL+VL SFL    S K W S L+ LK+  +  IQ
Sbjct: 361 FNKILPNEGYEEISNNVVSYTEGNPLALKVLGSFL-RTKSKKEWNSALNKLKKIPNAEIQ 419

Query: 34  RVLIRSYNSL 5
           +VL  SY+ L
Sbjct: 420 KVLRLSYDEL 429


>ref|XP_002523481.1| TMV resistance protein N, putative [Ricinus communis]
           gi|223537309|gb|EEF38940.1| TMV resistance protein N,
           putative [Ricinus communis]
          Length = 944

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/70 (44%), Positives = 42/70 (60%)
 Frame = -1

Query: 214 FRSKIPMDGYNELAKEALQYCQGNPLALEVLASFLSEGNSVKFWRSTLDLLKRDFSPRIQ 35
           FR + P   Y +L+K  + Y +GNPL L+VL SFL + N +K W S L  L+R  +  IQ
Sbjct: 359 FRQECPKADYMKLSKRVINYAKGNPLGLKVLGSFLYQRN-IKEWESALHKLERSTNKEIQ 417

Query: 34  RVLIRSYNSL 5
            VL  SY+ L
Sbjct: 418 NVLKVSYDGL 427


>ref|XP_002276075.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1154

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/69 (47%), Positives = 43/69 (62%)
 Frame = -1

Query: 211 RSKIPMDGYNELAKEALQYCQGNPLALEVLASFLSEGNSVKFWRSTLDLLKRDFSPRIQR 32
           + KIP D + E++KE + Y QG PLALEVL SFL      + WR+ LD LK   + +IQ 
Sbjct: 358 KHKIPCDDFMEVSKEVIGYAQGLPLALEVLGSFLFSMTKEE-WRNQLDKLKSTPNMKIQE 416

Query: 31  VLIRSYNSL 5
           VL  SY+ L
Sbjct: 417 VLKVSYDGL 425


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