BLASTX nr result

ID: Atractylodes21_contig00034711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034711
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210...    65   5e-17
gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein ...    68   2e-16
ref|XP_004160859.1| PREDICTED: uncharacterized protein LOC101228...    63   1e-15
emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]    61   2e-15
gb|AAO23078.1| polyprotein [Glycine max]                               62   1e-14

>ref|XP_004140366.1| PREDICTED: uncharacterized protein LOC101210176 [Cucumis sativus]
          Length = 1740

 Score = 65.5 bits (158), Expect(2) = 5e-17
 Identities = 27/52 (51%), Positives = 44/52 (84%)
 Frame = +1

Query: 133 YRQQSLARRPFDKLSARFYGPYKVIQRIGKVAYKMELPSHT*IHSLFNVSTL 288
           YRQ+SLA++  +KL+A+FYGPY+V++ IG+VAY+++LP    IH++F++S L
Sbjct: 565 YRQRSLAKKRCEKLAAKFYGPYRVMEEIGEVAYRLDLPLEAMIHNVFHISQL 616



 Score = 47.0 bits (110), Expect(2) = 5e-17
 Identities = 21/40 (52%), Positives = 29/40 (72%)
 Frame = +2

Query: 5   DTILDELRMNILRAQQKQKKWADLRRSDLEFAVGDRVFLK 124
           D ++  L+ N+L AQ + KK ADLRR +L+F VGD V+LK
Sbjct: 522 DLVISALKENLLTAQNRMKKQADLRRRELKFKVGDEVYLK 561


>gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein [Arabidopsis thaliana]
          Length = 1264

 Score = 67.8 bits (164), Expect(2) = 2e-16
 Identities = 28/54 (51%), Positives = 45/54 (83%)
 Frame = +1

Query: 127  QQYRQQSLARRPFDKLSARFYGPYKVIQRIGKVAYKMELPSHT*IHSLFNVSTL 288
            Q YRQ+++ RRP  KL+A+F+GP+++++RIG VAY++ LP+ + IH++FNVS L
Sbjct: 1067 QPYRQRTVVRRPCYKLAAKFFGPFEIVERIGNVAYRINLPASSKIHNVFNVSQL 1120



 Score = 42.4 bits (98), Expect(2) = 2e-16
 Identities = 20/40 (50%), Positives = 29/40 (72%)
 Frame = +2

Query: 5    DTILDELRMNILRAQQKQKKWADLRRSDLEFAVGDRVFLK 124
            D +L+ +R N+ RAQ+  K+ AD++R D+ FAVGD V LK
Sbjct: 1026 DLMLEHIRANLQRAQEIMKRNADMKRRDVVFAVGDWVHLK 1065


>ref|XP_004160859.1| PREDICTED: uncharacterized protein LOC101228347 [Cucumis sativus]
          Length = 145

 Score = 63.2 bits (152), Expect(2) = 1e-15
 Identities = 28/52 (53%), Positives = 41/52 (78%)
 Frame = +1

Query: 133 YRQQSLARRPFDKLSARFYGPYKVIQRIGKVAYKMELPSHT*IHSLFNVSTL 288
           YRQ SL ++  +KLS +++GPYK+I++IG VAYK++LPS   IH +F+VS L
Sbjct: 79  YRQTSLRKKRNEKLSPKYFGPYKIIEKIGAVAYKLKLPSTAAIHPIFHVSQL 130



 Score = 44.3 bits (103), Expect(2) = 1e-15
 Identities = 19/40 (47%), Positives = 30/40 (75%)
 Frame = +2

Query: 5   DTILDELRMNILRAQQKQKKWADLRRSDLEFAVGDRVFLK 124
           D +L  L+ +++ AQ++  ++ADL+R D+EF VGD VFLK
Sbjct: 36  DIVLGVLKEHLIIAQEQMNRYADLKRRDMEFGVGDLVFLK 75


>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score = 61.2 bits (147), Expect(2) = 2e-15
 Identities = 29/54 (53%), Positives = 41/54 (75%)
 Frame = +1

Query: 127  QQYRQQSLARRPFDKLSARFYGPYKVIQRIGKVAYKMELPSHT*IHSLFNVSTL 288
            Q YRQ S+A R   KL+ RF+GPY+VI+++G VAYK+ LP  + IH++F+VS L
Sbjct: 1279 QPYRQTSVAFRGSMKLAPRFFGPYQVIEKVGSVAYKLALPPGSQIHNVFHVSLL 1332



 Score = 45.4 bits (106), Expect(2) = 2e-15
 Identities = 23/40 (57%), Positives = 27/40 (67%)
 Frame = +2

Query: 5    DTILDELRMNILRAQQKQKKWADLRRSDLEFAVGDRVFLK 124
            D IL ELR N+L+AQ + K  AD  R D  FAVGD V+LK
Sbjct: 1238 DAILRELRYNLLQAQNRMKCQADQHRRDASFAVGDYVYLK 1277


>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score = 62.0 bits (149), Expect(2) = 1e-14
 Identities = 30/54 (55%), Positives = 38/54 (70%)
 Frame = +1

Query: 127  QQYRQQSLARRPFDKLSARFYGPYKVIQRIGKVAYKMELPSHT*IHSLFNVSTL 288
            Q YRQ S   R   KLS R++GP+KV+ +IG VAYK+ELPS   IH +F+VS L
Sbjct: 1363 QPYRQHSAVLRKNQKLSMRYFGPFKVLAKIGDVAYKLELPSAARIHPVFHVSQL 1416



 Score = 42.0 bits (97), Expect(2) = 1e-14
 Identities = 18/40 (45%), Positives = 28/40 (70%)
 Frame = +2

Query: 5    DTILDELRMNILRAQQKQKKWADLRRSDLEFAVGDRVFLK 124
            D +L +L++N+ RAQQ  K+ AD +R D+ F +GD V +K
Sbjct: 1322 DALLAKLKINLTRAQQVMKRQADKKRLDVSFQIGDEVLVK 1361


Top