BLASTX nr result

ID: Atractylodes21_contig00034690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034690
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   102   1e-20
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]   101   7e-20
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group...    99   4e-19
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc...    98   6e-19
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote...    98   6e-19

>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  102 bits (253), Expect(2) = 1e-20
 Identities = 45/71 (63%), Positives = 56/71 (78%)
 Frame = +1

Query: 100 TELWHRRLGHVSERRLIELDKQKLLGRDKLEKLSFCEHCVYGKTCRVRFSAAQHKTRGIL 279
           T+LWH+RLGH+S R L EL+KQ +LG  KL  L FCEHCV+GK  RV+F+ A H+T+  L
Sbjct: 391 TKLWHQRLGHISHRGLQELEKQGVLGNYKLTDLPFCEHCVFGKATRVKFAKAIHETQNQL 450

Query: 280 DYIHADLWGPS 312
           DYIH+DLWGPS
Sbjct: 451 DYIHSDLWGPS 461



 Score = 22.7 bits (47), Expect(2) = 1e-20
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 5   MKGVRKNGLYSLQADVV 55
           MKG  KNGLY+L    V
Sbjct: 360 MKGTIKNGLYTLIGQTV 376


>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
          Length = 735

 Score =  101 bits (251), Expect = 7e-20
 Identities = 44/74 (59%), Positives = 57/74 (77%)
 Frame = +1

Query: 91  LSQTELWHRRLGHVSERRLIELDKQKLLGRDKLEKLSFCEHCVYGKTCRVRFSAAQHKTR 270
           +  T+LWH+RLGH+S R L EL+KQ +LG  KL  L+FCEHCV+GKT RV+F+   H+T+
Sbjct: 118 MGTTKLWHQRLGHISHRGLQELEKQGVLGNYKLTNLTFCEHCVFGKTTRVKFAKVVHETQ 177

Query: 271 GILDYIHADLWGPS 312
             LDYIH+DLW PS
Sbjct: 178 NQLDYIHSDLWEPS 191


>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1175

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/83 (54%), Positives = 59/83 (71%)
 Frame = +1

Query: 64  SAAVVETKVLSQTELWHRRLGHVSERRLIELDKQKLLGRDKLEKLSFCEHCVYGKTCRVR 243
           +AAVV     S+T +WH RLGH+SE  + EL K+ LL       + FCEHCV+GK  RV+
Sbjct: 309 TAAVVSKDEPSKTNMWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVK 368

Query: 244 FSAAQHKTRGILDYIHADLWGPS 312
           F+ + H+T+GILDY+HADLWGPS
Sbjct: 369 FNTSVHRTKGILDYVHADLWGPS 391


>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1131

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/83 (54%), Positives = 58/83 (69%)
 Frame = +1

Query: 64  SAAVVETKVLSQTELWHRRLGHVSERRLIELDKQKLLGRDKLEKLSFCEHCVYGKTCRVR 243
           +AA V     S+T LWH RLGH+SE  + EL K+ LL       + FCEHCV+GK  RV+
Sbjct: 364 TAAAVSKDEPSKTNLWHMRLGHMSELGMAELMKRNLLDGYTQGNMKFCEHCVFGKHKRVK 423

Query: 244 FSAAQHKTRGILDYIHADLWGPS 312
           F+ + H+T+GILDY+HADLWGPS
Sbjct: 424 FNTSVHRTKGILDYVHADLWGPS 446


>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
           Group] gi|22655747|gb|AAN04164.1| Putative
           retrotransposon protein [Oryza sativa Japonica Group]
           gi|31431214|gb|AAP53029.1| retrotransposon protein,
           putative, Ty1-copia subclass, expressed [Oryza sativa
           Japonica Group]
          Length = 1229

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/83 (54%), Positives = 58/83 (69%)
 Frame = +1

Query: 64  SAAVVETKVLSQTELWHRRLGHVSERRLIELDKQKLLGRDKLEKLSFCEHCVYGKTCRVR 243
           +AA V     S+T LWH RLGH+SE  + EL K+ LL       + FCEHCV+GK  RV+
Sbjct: 411 TAAAVSKDEPSKTNLWHMRLGHMSELGMAELMKRNLLDGCTQGNMKFCEHCVFGKHKRVK 470

Query: 244 FSAAQHKTRGILDYIHADLWGPS 312
           F+ + H+T+GILDY+HADLWGPS
Sbjct: 471 FNTSVHRTKGILDYVHADLWGPS 493


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