BLASTX nr result

ID: Atractylodes21_contig00034675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034675
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA94365.1| retrotransposon protein, putative, unclassified [...   169   3e-40
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc...   167   1e-39
gb|ABB47203.2| retrotransposon protein, putative, unclassified [...   167   1e-39
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...   167   1e-39
gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group]    167   1e-39

>gb|ABA94365.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1064

 Score =  169 bits (427), Expect = 3e-40
 Identities = 83/118 (70%), Positives = 93/118 (78%)
 Frame = +2

Query: 2    GDLHETVYIHQPTGFVDPRFPSHVCLLRKSLYGLKQAPRAWYNRFATFVLSHGFTNSKCD 181
            G+L ETVY  QP+GFVDP  P+ VCLL+KSLYGLKQAPRAWY RFAT++   GFT+S  D
Sbjct: 714  GNLEETVYCQQPSGFVDPSAPTAVCLLQKSLYGLKQAPRAWYQRFATYICQLGFTSSASD 773

Query: 182  TSLFTYRHGDKRAYLLLYVDDIILTASDTGLLNHIIKTLSSEFAMSDLGALHHFLGIS 355
            TSLF Y+ GD  AYLLLYVDDI+LTAS T LL HI   L SEFAM+DLG LH FLGIS
Sbjct: 774  TSLFIYKDGDNIAYLLLYVDDILLTASSTSLLQHITARLHSEFAMTDLGDLHFFLGIS 831


>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 978

 Score =  167 bits (422), Expect = 1e-39
 Identities = 83/118 (70%), Positives = 92/118 (77%)
 Frame = +2

Query: 2   GDLHETVYIHQPTGFVDPRFPSHVCLLRKSLYGLKQAPRAWYNRFATFVLSHGFTNSKCD 181
           G+L ETVY  QP+GFVDP  P+ VCLL+KSLYGLKQAPRAWY RFAT++   GFT+S  D
Sbjct: 626 GNLEETVYCQQPSGFVDPSAPNAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFTSSASD 685

Query: 182 TSLFTYRHGDKRAYLLLYVDDIILTASDTGLLNHIIKTLSSEFAMSDLGALHHFLGIS 355
           TSLF Y+ GD  AYLLLYVDDIILTAS   LL HI   L SEFAM+DLG LH FLGIS
Sbjct: 686 TSLFVYKDGDNIAYLLLYVDDIILTASSATLLQHITARLHSEFAMTDLGDLHFFLGIS 743


>gb|ABB47203.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1050

 Score =  167 bits (422), Expect = 1e-39
 Identities = 83/118 (70%), Positives = 92/118 (77%)
 Frame = +2

Query: 2    GDLHETVYIHQPTGFVDPRFPSHVCLLRKSLYGLKQAPRAWYNRFATFVLSHGFTNSKCD 181
            G+L ETVY  QP GFVDP  P+ VCLL+KSLYGLKQAPRAWY RFAT++   GFT+S  D
Sbjct: 752  GNLEETVYCQQPFGFVDPSEPTAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFTSSASD 811

Query: 182  TSLFTYRHGDKRAYLLLYVDDIILTASDTGLLNHIIKTLSSEFAMSDLGALHHFLGIS 355
            TSLF Y+ GD  AYLLLYVDDI+LTAS T LL HI   L SEFAM+DLG LH FLGIS
Sbjct: 812  TSLFIYKDGDNVAYLLLYVDDILLTASSTSLLQHITARLHSEFAMTDLGDLHFFLGIS 869


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score =  167 bits (422), Expect = 1e-39
 Identities = 83/118 (70%), Positives = 92/118 (77%)
 Frame = +2

Query: 2    GDLHETVYIHQPTGFVDPRFPSHVCLLRKSLYGLKQAPRAWYNRFATFVLSHGFTNSKCD 181
            G+L ETVY  QP GFVDP  P+ VCLL+KSLYGLKQAPRAWY RFAT++   GFT+S  D
Sbjct: 952  GNLEETVYCQQPFGFVDPSEPTAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFTSSASD 1011

Query: 182  TSLFTYRHGDKRAYLLLYVDDIILTASDTGLLNHIIKTLSSEFAMSDLGALHHFLGIS 355
            TSLF Y+ GD  AYLLLYVDDI+LTAS T LL HI   L SEFAM+DLG LH FLGIS
Sbjct: 1012 TSLFIYKDGDNVAYLLLYVDDILLTASSTSLLQHITARLHSEFAMTDLGDLHFFLGIS 1069


>gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group]
          Length = 1146

 Score =  167 bits (422), Expect = 1e-39
 Identities = 83/118 (70%), Positives = 92/118 (77%)
 Frame = +2

Query: 2    GDLHETVYIHQPTGFVDPRFPSHVCLLRKSLYGLKQAPRAWYNRFATFVLSHGFTNSKCD 181
            G+L ETVY  QP GFVDP  P+ VCLL+KSLYGLKQAPRAWY RFAT++   GFT+S  D
Sbjct: 848  GNLEETVYCQQPFGFVDPSEPTAVCLLQKSLYGLKQAPRAWYQRFATYIRQLGFTSSASD 907

Query: 182  TSLFTYRHGDKRAYLLLYVDDIILTASDTGLLNHIIKTLSSEFAMSDLGALHHFLGIS 355
            TSLF Y+ GD  AYLLLYVDDI+LTAS T LL HI   L SEFAM+DLG LH FLGIS
Sbjct: 908  TSLFIYKDGDNVAYLLLYVDDILLTASSTSLLQHITARLHSEFAMTDLGDLHFFLGIS 965


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