BLASTX nr result

ID: Atractylodes21_contig00034669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034669
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510812.1| conserved hypothetical protein [Ricinus comm...    59   3e-07
ref|XP_002321898.1| predicted protein [Populus trichocarpa] gi|1...    58   7e-07

>ref|XP_002510812.1| conserved hypothetical protein [Ricinus communis]
           gi|223549927|gb|EEF51414.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 142

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
 Frame = -2

Query: 358 MDEDDEGKSSSFKEQRRAHYDEFHMVRELRRKGSLXXXXXXXXXXXXXXXXDTPSS--LA 185
           M++D+E +S+SFKE RRAHYDEF  V+ELRRKGS                    SS  L+
Sbjct: 59  MEQDEEDRSASFKEHRRAHYDEFRKVKELRRKGSFLEDEDEEIGSDKGNDGKYDSSSLLS 118

Query: 184 VGVEDIDITD 155
            GVE IDI +
Sbjct: 119 AGVEHIDIEE 128


>ref|XP_002321898.1| predicted protein [Populus trichocarpa] gi|118488310|gb|ABK95974.1|
           unknown [Populus trichocarpa]
           gi|222868894|gb|EEF06025.1| predicted protein [Populus
           trichocarpa]
          Length = 177

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/86 (44%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
 Frame = -2

Query: 358 MDEDDEG----KSSSFKEQRRAHYDEFHMVRELRRKGSLXXXXXXXXXXXXXXXXDTPSS 191
           M++D+E     +SSSF+E RRAHYDEF  V+ELRRKGS                    SS
Sbjct: 93  MEQDEEDSETDRSSSFRELRRAHYDEFRKVKELRRKGSFLEDEDDEENGAEKEG---TSS 149

Query: 190 LAVGVEDIDITDVEGVPEPKQSSPPA 113
           L  GV DI+I +       K SSPPA
Sbjct: 150 LTAGVRDIEIEE-GAATSHKNSSPPA 174


Top