BLASTX nr result
ID: Atractylodes21_contig00034641
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00034641
(207 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003612846.1| Pentatricopeptide repeat-containing protein ... 80 1e-13
ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containi... 80 2e-13
emb|CBI35192.3| unnamed protein product [Vitis vinifera] 80 2e-13
ref|XP_002517612.1| pentatricopeptide repeat-containing protein,... 78 8e-13
ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containi... 77 1e-12
>ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 892
Score = 80.5 bits (197), Expect = 1e-13
Identities = 35/68 (51%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Frame = +1
Query: 4 GLQPNVLTYNIMIDGFCKKGELDKANALFLEMK-GGLQPDVRTYNIMIDGFCKKGELDKA 180
G+ P+V +Y+I+IDGFC+KG +D+A+ +F EM+ G+ P++ +Y+I+IDGFCK+G +DKA
Sbjct: 310 GILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKA 369
Query: 181 NALFLEMK 204
+F EMK
Sbjct: 370 LEVFEEMK 377
Score = 80.1 bits (196), Expect = 2e-13
Identities = 36/67 (53%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Frame = +1
Query: 4 GLQPNVLTYNIMIDGFCKKGELDKANALFLEMK-GGLQPDVRTYNIMIDGFCKKGELDKA 180
G+ PN+ +Y+I+IDGFCK+G +DKA +F EMK G+ PDV +Y+I+IDGFC+KG++D A
Sbjct: 345 GILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSA 404
Query: 181 NALFLEM 201
+ EM
Sbjct: 405 IKFWEEM 411
Score = 65.9 bits (159), Expect = 3e-09
Identities = 30/60 (50%), Positives = 46/60 (76%), Gaps = 1/60 (1%)
Frame = +1
Query: 28 YNIMIDGFCKKGELDKANALFLEMKG-GLQPDVRTYNIMIDGFCKKGELDKANALFLEMK 204
+N +I G C+ G LD+A+ +F EMK G+ PDV +Y+I+IDGFC+KG +D+A+ +F EM+
Sbjct: 283 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 342
Score = 55.1 bits (131), Expect = 6e-06
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +1
Query: 4 GLQPNVLTYNIMIDGFCKKGELDKANALFLEMK-GGLQPDVRTYNIMIDGFCKKGELDKA 180
G PNV+TY I+ + K + ++A+ L+ +MK G+ PD Y ++I FC GE+++A
Sbjct: 625 GCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRA 684
Query: 181 NALFLEMK 204
ALF EMK
Sbjct: 685 EALFDEMK 692
>ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 79.7 bits (195), Expect = 2e-13
Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +1
Query: 7 LQPNVLTYNIMIDGFCKKGELDKANALFLEMKG-GLQPDVRTYNIMIDGFCKKGELDKAN 183
L ++L YNI IDG C+ GEL+ A LF + GLQPDVRTYNIMI G CK+G LD+AN
Sbjct: 531 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN 590
Query: 184 ALFLEM 201
LF +M
Sbjct: 591 KLFRKM 596
Score = 62.0 bits (149), Expect = 5e-08
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 RGLQPNVLTYNIMIDGFCKKGELDKANALFLEM-KGGLQPDVRTYNIMIDGFCKKGELDK 177
RG++P+V+TY ++DG C + E+D+A +F M G P+VR+YNI+I+G+C+ +DK
Sbjct: 389 RGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDK 448
Query: 178 ANALFLEM 201
A L +M
Sbjct: 449 AMGLLEQM 456
Score = 62.0 bits (149), Expect = 5e-08
Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 RGLQPNVLTYNIMIDGFCKKGELDKANALFLEM-KGGLQPDVRTYNIMIDGFCKKGELDK 177
+GLQP+V TYNIMI G CK+G LD+AN LF +M + G D YN +I GF + E
Sbjct: 564 KGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFG 623
Query: 178 ANALFLEM 201
A L EM
Sbjct: 624 ATQLLQEM 631
>emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 79.7 bits (195), Expect = 2e-13
Identities = 39/66 (59%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +1
Query: 7 LQPNVLTYNIMIDGFCKKGELDKANALFLEMKG-GLQPDVRTYNIMIDGFCKKGELDKAN 183
L ++L YNI IDG C+ GEL+ A LF + GLQPDVRTYNIMI G CK+G LD+AN
Sbjct: 879 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN 938
Query: 184 ALFLEM 201
LF +M
Sbjct: 939 KLFRKM 944
Score = 62.8 bits (151), Expect = 3e-08
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 RGLQPNVLTYNIMIDGFCKKGELDKANALFLEM-KGGLQPDVRTYNIMIDGFCKKGELDK 177
+GLQPNV TYNIMI G CK+G L +A+ LF EM K G P+ TYN++ GF + E +
Sbjct: 424 KGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALR 483
Query: 178 ANALFLEM 201
L EM
Sbjct: 484 TIELLEEM 491
Score = 62.0 bits (149), Expect = 5e-08
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 RGLQPNVLTYNIMIDGFCKKGELDKANALFLEM-KGGLQPDVRTYNIMIDGFCKKGELDK 177
RG++P+V+TY ++DG C + E+D+A +F M G P+VR+YNI+I+G+C+ +DK
Sbjct: 737 RGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDK 796
Query: 178 ANALFLEM 201
A L +M
Sbjct: 797 AMGLLEQM 804
Score = 57.8 bits (138), Expect = 9e-07
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 RGLQPNVLTYNIMIDGFCKKGELDKANALFLEM-KGGLQPDVRTYNIMIDGFCKKGELDK 177
RG++PNV+TYN ++DG C + E+D A +F M +V +YN +I+G+CK +DK
Sbjct: 249 RGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK 308
Query: 178 ANALFLEM 201
A LF EM
Sbjct: 309 AMYLFEEM 316
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +1
Query: 1 RGLQPNVLTYNIMIDGFCKKGELDKANALFLEMKGG-LQPDVRTYNIMIDGFCKKGELDK 177
RG P+++TY + D CK LDKA AL ++G PD++ Y ++DG C+ GEL+
Sbjct: 354 RGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELED 413
Query: 178 ANALF--LEMKG 207
A LF L KG
Sbjct: 414 ARDLFSNLSSKG 425
Score = 55.8 bits (133), Expect = 3e-06
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 7 LQPNVLTYNIMIDGFCKKGELDKANALFLEMKG-GLQPDVRTYNIMIDGFCKKGELDKAN 183
L PN +TYN +I G C G L A +LF EM G PD+ TY + D CK LDKA
Sbjct: 321 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAM 380
Query: 184 ALFLEMKG 207
AL ++G
Sbjct: 381 ALLKAIEG 388
Score = 55.1 bits (131), Expect = 6e-06
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +1
Query: 4 GLQPNVLTYNIMIDGFCKKGELDKANALFLEM-KGGLQPDVRTYNIMIDGFCKKGELDKA 180
G QPNV+TY +I+G CK ++ +A +F EM G+ P++ TYN +I G CK E
Sbjct: 145 GFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHV 204
Query: 181 NALFLEM 201
L EM
Sbjct: 205 TTLMNEM 211
>ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543244|gb|EEF44776.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 794
Score = 77.8 bits (190), Expect = 8e-13
Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 RGLQPNVLTYNIMIDGFCKKGELDKANALFLEMK-GGLQPDVRTYNIMIDGFCKKGELDK 177
RG PN++ YN +IDG+CKKG+ ++AN LF E+K G P V+TY +I+GFCKKG+ +
Sbjct: 201 RGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEV 260
Query: 178 ANALFLEM 201
+ L +EM
Sbjct: 261 VDKLLVEM 268
Score = 57.0 bits (136), Expect = 2e-06
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +1
Query: 10 QPNVLTYNIMIDGFCKKGELDKANALFLEMKG-GLQPDVRTYNIMIDGFCKKGELDKANA 186
+PNV+TY ++I+GFC G++++A F +M L+P+V TY I+I FCK L KA +
Sbjct: 554 KPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACS 613
Query: 187 LFLEM 201
F +M
Sbjct: 614 FFEQM 618
Score = 55.8 bits (133), Expect = 3e-06
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Frame = +1
Query: 25 TYNIMIDGFCKKGELDKANALFLEMKG-GLQPDVRTYNIMIDGFCKKGELDKANALFLEM 201
T IM+ G CK+G+++ L + G G P++ YN +IDG+CKKG+ ++AN LF E+
Sbjct: 174 TVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKEL 233
Query: 202 K 204
K
Sbjct: 234 K 234
>ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 77.4 bits (189), Expect = 1e-12
Identities = 36/70 (51%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +1
Query: 1 RGLQPNVLTYNIMIDGFCKKGELDKANALFLEMK-GGLQPDVRTYNIMIDGFCKKGELDK 177
+GL PN TYN +I G CK+G +DKA+ L EM G+ PD+ TYNI+IDG CK GE+++
Sbjct: 629 KGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIER 688
Query: 178 ANALFLEMKG 207
A LF +++G
Sbjct: 689 AKNLFDDIEG 698
Score = 66.6 bits (161), Expect = 2e-09
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 RGLQPNVLTYNIMIDGFCKKGELDKANALFLEMKG-GLQPDVRTYNIMIDGFCKKGELDK 177
+G+ P+++TYNI+IDG CK GE+++A LF +++G GL P+ TY M+DG+CK
Sbjct: 664 KGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTA 723
Query: 178 ANALFLEM 201
A L EM
Sbjct: 724 AFQLLEEM 731
Score = 57.4 bits (137), Expect = 1e-06
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 RGLQPNVLTYNIMIDGFCKKGELDKANALFLEMKG-GLQPDVRTYNIMIDGFCKKGELDK 177
+G PN++TYN++I G C+ LD+A L M GL PD+ TY+I+I+GFC + +
Sbjct: 244 KGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSRE 303
Query: 178 ANALFLEM 201
A + LEM
Sbjct: 304 AKLMLLEM 311
Score = 56.2 bits (134), Expect = 3e-06
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +1
Query: 1 RGLQPNVLTYNIMIDGFCKKGELDKANALFLEM-KGGLQPDVRTYNIMIDGFCKKGELDK 177
+G+ P+V YN +I GFCK +++A +EM + L+P+ TY IDG+ K GE++
Sbjct: 489 QGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEI 548
Query: 178 ANALFLEM 201
A+ F EM
Sbjct: 549 ADRYFNEM 556
Score = 55.8 bits (133), Expect = 3e-06
Identities = 24/68 (35%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +1
Query: 4 GLQPNVLTYNIMIDGFCKKGELDKANALFLEM-KGGLQPDVRTYNIMIDGFCKKGELDKA 180
G++ N++ +N +++G CK G+++KA + EM + G++PD +TY+++I+G C+ + +A
Sbjct: 350 GIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARA 409
Query: 181 NALFLEMK 204
L EMK
Sbjct: 410 FELLDEMK 417