BLASTX nr result

ID: Atractylodes21_contig00034640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034640
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
emb|CBI32450.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002319601.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002328377.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08
ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group] g...    62   5e-08

>ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/67 (47%), Positives = 43/67 (64%)
 Frame = +2

Query: 2   NIMIDGFCKKGELDEGLKLFNILDGEGPAPDIVTCNCLIDRMFKSGETDAACGLFSSLSA 181
           NI+I GFC  GEL +GL  F  ++  G  P++VT N LID   K G  D A GL  S+S+
Sbjct: 218 NILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS 277

Query: 182 RGLQPNV 202
           +G+QPN+
Sbjct: 278 KGMQPNL 284


>emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 32/67 (47%), Positives = 43/67 (64%)
 Frame = +2

Query: 2   NIMIDGFCKKGELDEGLKLFNILDGEGPAPDIVTCNCLIDRMFKSGETDAACGLFSSLSA 181
           NI+I GFC  GEL +GL  F  ++  G  P++VT N LID   K G  D A GL  S+S+
Sbjct: 14  NILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS 73

Query: 182 RGLQPNV 202
           +G+QPN+
Sbjct: 74  KGMQPNL 80


>ref|XP_002319601.1| predicted protein [Populus trichocarpa] gi|222857977|gb|EEE95524.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/67 (41%), Positives = 45/67 (67%)
 Frame = +2

Query: 2   NIMIDGFCKKGELDEGLKLFNILDGEGPAPDIVTCNCLIDRMFKSGETDAACGLFSSLSA 181
           N ++DG+C + ++DE  KLFNI+D +G AP++ + N LI+   KSG  D A GL + +S 
Sbjct: 189 NALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSH 248

Query: 182 RGLQPNV 202
           + L P++
Sbjct: 249 KSLTPDI 255


>ref|XP_002328377.1| predicted protein [Populus trichocarpa] gi|222838092|gb|EEE76457.1|
           predicted protein [Populus trichocarpa]
          Length = 688

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/65 (47%), Positives = 42/65 (64%)
 Frame = +2

Query: 2   NIMIDGFCKKGELDEGLKLFNILDGEGPAPDIVTCNCLIDRMFKSGETDAACGLFSSLSA 181
           +I+++G CK G LDE LKLF  +  +   PDI+    LI+ MF  G+ + A GLFS LSA
Sbjct: 587 SILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSA 646

Query: 182 RGLQP 196
            G+QP
Sbjct: 647 DGIQP 651


>ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
           gi|50253069|dbj|BAD29317.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza
           sativa Japonica Group]
          Length = 845

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/66 (40%), Positives = 40/66 (60%)
 Frame = +2

Query: 2   NIMIDGFCKKGELDEGLKLFNILDGEGPAPDIVTCNCLIDRMFKSGETDAACGLFSSLSA 181
           N++I G C  G ++   +L  +++G+G   D  T N LI+ + K G TD AC LF SL  
Sbjct: 398 NLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLET 457

Query: 182 RGLQPN 199
           RG++PN
Sbjct: 458 RGIKPN 463


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