BLASTX nr result

ID: Atractylodes21_contig00034624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034624
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75734.1| hypothetical protein VITISV_030148 [Vitis vinifera]   113   2e-23
ref|XP_002308759.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_003635397.1| PREDICTED: sister chromatid cohesion protein...   111   5e-23
emb|CBI33245.3| unnamed protein product [Vitis vinifera]              111   5e-23
ref|XP_002323118.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22

>emb|CAN75734.1| hypothetical protein VITISV_030148 [Vitis vinifera]
          Length = 1922

 Score =  113 bits (282), Expect = 2e-23
 Identities = 60/92 (65%), Positives = 67/92 (72%)
 Frame = +3

Query: 3    KYACAFXXXXXXXXXXXXEKSEDTHNLSDIIQMCQQGKARQLSVQSDGNSSVAHPEYILP 182
            KYACAF            E  ED HNL DIIQM  Q KARQLS QSD  SS+A+PE+ILP
Sbjct: 946  KYACAFSFNIVGSQPSEFE--EDKHNLGDIIQMYHQAKARQLSTQSDA-SSLAYPEFILP 1002

Query: 183  YLIHALAHHPSCPNIDECKDAKAYEPIYRKLY 278
            YL+HALAHH SCP+IDECKD KA+EPIY KL+
Sbjct: 1003 YLVHALAHH-SCPDIDECKDVKAFEPIYWKLH 1033


>ref|XP_002308759.1| predicted protein [Populus trichocarpa] gi|222854735|gb|EEE92282.1|
            predicted protein [Populus trichocarpa]
          Length = 1411

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/92 (59%), Positives = 66/92 (71%)
 Frame = +3

Query: 3    KYACAFXXXXXXXXXXXXEKSEDTHNLSDIIQMCQQGKARQLSVQSDGNSSVAHPEYILP 182
            KYACAF            E  E+  NL+DIIQM QQ + RQ+SVQSD N S  +PEYI+P
Sbjct: 907  KYACAFLFNTTGSKSLDFE--EEKQNLADIIQMHQQARTRQVSVQSDANPSAVYPEYIIP 964

Query: 183  YLIHALAHHPSCPNIDECKDAKAYEPIYRKLY 278
            YL+HALAH  SCPN++ECKD KA+EPIYR+LY
Sbjct: 965  YLVHALAHQ-SCPNVNECKDVKAFEPIYRQLY 995


>ref|XP_003635397.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog B-A-like,
           partial [Vitis vinifera]
          Length = 572

 Score =  111 bits (278), Expect = 5e-23
 Identities = 59/92 (64%), Positives = 66/92 (71%)
 Frame = +3

Query: 3   KYACAFXXXXXXXXXXXXEKSEDTHNLSDIIQMCQQGKARQLSVQSDGNSSVAHPEYILP 182
           KYACAF            E  ED HNL DIIQM  Q KARQLS QSD  SS+ +PE+ILP
Sbjct: 209 KYACAFSFNIVGSQPSEFE--EDKHNLGDIIQMYHQAKARQLSTQSDA-SSLVYPEFILP 265

Query: 183 YLIHALAHHPSCPNIDECKDAKAYEPIYRKLY 278
           YL+HALAHH SCP+IDECKD KA+EPIY KL+
Sbjct: 266 YLVHALAHH-SCPDIDECKDVKAFEPIYWKLH 296


>emb|CBI33245.3| unnamed protein product [Vitis vinifera]
          Length = 870

 Score =  111 bits (278), Expect = 5e-23
 Identities = 59/92 (64%), Positives = 66/92 (71%)
 Frame = +3

Query: 3   KYACAFXXXXXXXXXXXXEKSEDTHNLSDIIQMCQQGKARQLSVQSDGNSSVAHPEYILP 182
           KYACAF            E  ED HNL DIIQM  Q KARQLS QSD  SS+ +PE+ILP
Sbjct: 326 KYACAFSFNIVGSQPSEFE--EDKHNLGDIIQMYHQAKARQLSTQSDA-SSLVYPEFILP 382

Query: 183 YLIHALAHHPSCPNIDECKDAKAYEPIYRKLY 278
           YL+HALAHH SCP+IDECKD KA+EPIY KL+
Sbjct: 383 YLVHALAHH-SCPDIDECKDVKAFEPIYWKLH 413


>ref|XP_002323118.1| predicted protein [Populus trichocarpa] gi|222867748|gb|EEF04879.1|
            predicted protein [Populus trichocarpa]
          Length = 1417

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/92 (59%), Positives = 63/92 (68%)
 Frame = +3

Query: 3    KYACAFXXXXXXXXXXXXEKSEDTHNLSDIIQMCQQGKARQLSVQSDGNSSVAHPEYILP 182
            KYACAF            E  E+  NL+DIIQM QQ K R + VQSD N    +PEYILP
Sbjct: 913  KYACAFLFNMTGSKPLDFE--EENQNLADIIQMLQQAKTRHVPVQSDANPLSVYPEYILP 970

Query: 183  YLIHALAHHPSCPNIDECKDAKAYEPIYRKLY 278
            YL+HALAH  SCPN+DECKD KA+EPIYR+LY
Sbjct: 971  YLVHALAHQ-SCPNVDECKDIKAFEPIYRQLY 1001


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