BLASTX nr result

ID: Atractylodes21_contig00034602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034602
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   198   3e-49
emb|CAN67160.1| hypothetical protein VITISV_039498 [Vitis vinifera]   172   3e-41
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...   171   6e-41
emb|CAN64356.1| hypothetical protein VITISV_020633 [Vitis vinifera]   170   1e-40
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]   169   2e-40

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  198 bits (504), Expect = 3e-49
 Identities = 89/131 (67%), Positives = 112/131 (85%), Gaps = 1/131 (0%)
 Frame = +3

Query: 3    DALLVVVDRLSEYSHFILLKHPYTAKSIADIFVRDIIRLHGIPKSIVSDRDPLFMSQFWQ 182
            +A+LVVVDRLS+YSHFILLKHPYTAK IAD+F+R+++RLHGIP SIVSDRDP+FMS FW+
Sbjct: 952  EAVLVVVDRLSKYSHFILLKHPYTAKVIADVFIREVVRLHGIPLSIVSDRDPIFMSNFWK 1011

Query: 183  EIFRLQSTKLQMSSSYHSESDEQTEVINCCLESYLHCFAVDQPHSW-SWIPWAEF*YNFT 359
            E+F+LQ TKL+MS +YH E+D QTEV+N CLE+YL CF  DQP +W SWIPWAE+ +N +
Sbjct: 1012 ELFKLQGTKLKMSIAYHPETDGQTEVVNRCLETYLRCFIADQPKNWASWIPWAEYWFNTS 1071

Query: 360  FHGSMGITSFE 392
            +H + G T FE
Sbjct: 1072 YHAATGHTPFE 1082


>emb|CAN67160.1| hypothetical protein VITISV_039498 [Vitis vinifera]
          Length = 359

 Score =  172 bits (436), Expect = 3e-41
 Identities = 76/131 (58%), Positives = 102/131 (77%), Gaps = 1/131 (0%)
 Frame = +3

Query: 3   DALLVVVDRLSEYSHFILLKHPYTAKSIADIFVRDIIRLHGIPKSIVSDRDPLFMSQFWQ 182
           + +LVVVDRLS+ +HF  L HP+TAK + + FV  +++LHG+PKSI+SDRDP+FMSQFWQ
Sbjct: 57  NTILVVVDRLSKSAHFFALAHPFTAKMVVEKFVEGVVKLHGMPKSIISDRDPVFMSQFWQ 116

Query: 183 EIFRLQSTKLQMSSSYHSESDEQTEVINCCLESYLHCFAVDQPHSWS-WIPWAEF*YNFT 359
           E F+L  T+L+MSSSYHS+ D Q+EV+N C+E YL C+A   P  WS ++PWAEF YN T
Sbjct: 117 EFFKLSGTQLKMSSSYHSQMDGQSEVVNRCVEQYLRCYAHHHPRKWSFFLPWAEFWYNTT 176

Query: 360 FHGSMGITSFE 392
           +H S G+T F+
Sbjct: 177 YHASTGMTPFQ 187


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score =  171 bits (433), Expect = 6e-41
 Identities = 74/131 (56%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
 Frame = +3

Query: 3    DALLVVVDRLSEYSHFILLKHPYTAKSIADIFVRDIIRLHGIPKSIVSDRDPLFMSQFWQ 182
            + +LVVVDRLS+YSHFI LKHP+TAK++ + F+RD+++LHG P ++VSDRD +F+S FW 
Sbjct: 1286 NCILVVVDRLSKYSHFIPLKHPFTAKTVVEAFIRDVVKLHGFPNTLVSDRDRIFLSGFWS 1345

Query: 183  EIFRLQSTKLQMSSSYHSESDEQTEVINCCLESYLHCFAVDQPHSW-SWIPWAEF*YNFT 359
            E+F+LQ T LQ S++YH ++D QTEV+N CLESYL CFA  +P SW  W+PWAE+ YN +
Sbjct: 1346 ELFKLQGTGLQKSTAYHPQTDGQTEVVNRCLESYLRCFAGRRPTSWFQWLPWAEYWYNTS 1405

Query: 360  FHGSMGITSFE 392
            +H +   T F+
Sbjct: 1406 YHSATKTTPFQ 1416


>emb|CAN64356.1| hypothetical protein VITISV_020633 [Vitis vinifera]
          Length = 1852

 Score =  170 bits (430), Expect = 1e-40
 Identities = 75/131 (57%), Positives = 104/131 (79%), Gaps = 1/131 (0%)
 Frame = +3

Query: 3    DALLVVVDRLSEYSHFILLKHPYTAKSIADIFVRDIIRLHGIPKSIVSDRDPLFMSQFWQ 182
            D+++VVVDRLS+Y+HFI L HP++AK IA+ FV +II+LHG+PKSI+SDRDP+F+S+FWQ
Sbjct: 897  DSIMVVVDRLSKYAHFIALSHPFSAKMIAEKFVENIIKLHGMPKSIISDRDPIFVSKFWQ 956

Query: 183  EIFRLQSTKLQMSSSYHSESDEQTEVINCCLESYLHCFAVDQPHSW-SWIPWAEF*YNFT 359
            E F +  T+L++SS+YH ++D QTEV+N CLE YL CF    P  W S++ WAE+ YN T
Sbjct: 957  EFFTMSGTQLKLSSAYHPQTDGQTEVVNRCLEQYLRCFVHQWPRKWFSYLSWAEYWYNTT 1016

Query: 360  FHGSMGITSFE 392
            +H S G+T F+
Sbjct: 1017 YHCSTGMTPFQ 1027


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score =  169 bits (429), Expect = 2e-40
 Identities = 75/128 (58%), Positives = 102/128 (79%), Gaps = 1/128 (0%)
 Frame = +3

Query: 9    LLVVVDRLSEYSHFILLKHPYTAKSIADIFVRDIIRLHGIPKSIVSDRDPLFMSQFWQEI 188
            +LVVVDRLS+Y+HF LLKHP+ A+++A IFVRD+++LHG P+SI+SDRD +F+S+FW E+
Sbjct: 671  ILVVVDRLSKYAHFSLLKHPFXAQTVAAIFVRDVVKLHGFPRSIISDRDKVFLSRFWIEL 730

Query: 189  FRLQSTKLQMSSSYHSESDEQTEVINCCLESYLHCFAVDQPHSWS-WIPWAEF*YNFTFH 365
            FRLQ T L  S++YH ++D QTEV+N C+E+YL CF+ ++P  WS WI WAE+ YN TFH
Sbjct: 731  FRLQGTSLXHSTAYHXQTDGQTEVVNRCVETYLRCFSYNKPGRWSTWISWAEYWYNTTFH 790

Query: 366  GSMGITSF 389
             S   T F
Sbjct: 791  SSTNTTPF 798


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