BLASTX nr result

ID: Atractylodes21_contig00034594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034594
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...   117   1e-24
ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a...   117   1e-24
ref|XP_002458957.1| hypothetical protein SORBIDRAFT_03g043355 [S...   113   1e-23
ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis...   112   4e-23
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   110   1e-22

>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
           3a-like [Cucumis sativus]
          Length = 1639

 Score =  117 bits (292), Expect = 1e-24
 Identities = 62/118 (52%), Positives = 84/118 (71%)
 Frame = +2

Query: 2   LDVFKVAMQRNTIAHLDTGAGKTMIAIMIIKEVALSLSKQPSEKKLMIFLAPTRNLVEQQ 181
           ++VF+V M+RNTIA L TG+GKTMIA+M+IKE+  ++ K  S+KKL+IFLAPT +LV QQ
Sbjct: 44  MEVFEVGMRRNTIAVLGTGSGKTMIAVMLIKEIGKAM-KSSSDKKLIIFLAPTVHLVHQQ 102

Query: 182 FKVLQESTDLVVDFYHGAKVGVGKHINGKKVDDWDGAVWEHETKKNNIMVMTPQILLD 355
           F V+++ TD  V  Y+GA            VDDW+   WE ET + +++VMTPQILLD
Sbjct: 103 FNVIKDHTDFEVAEYYGA----------MGVDDWNMNCWEKETSERDVLVMTPQILLD 150


>ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
          Length = 1359

 Score =  117 bits (292), Expect = 1e-24
 Identities = 62/118 (52%), Positives = 84/118 (71%)
 Frame = +2

Query: 2   LDVFKVAMQRNTIAHLDTGAGKTMIAIMIIKEVALSLSKQPSEKKLMIFLAPTRNLVEQQ 181
           ++VF+V M+RNTIA L TG+GKTMIA+M+IKE+  ++ K  S+KKL+IFLAPT +LV QQ
Sbjct: 44  MEVFEVGMRRNTIAVLGTGSGKTMIAVMLIKEIGKAM-KSSSDKKLIIFLAPTVHLVHQQ 102

Query: 182 FKVLQESTDLVVDFYHGAKVGVGKHINGKKVDDWDGAVWEHETKKNNIMVMTPQILLD 355
           F V+++ TD  V  Y+GA            VDDW+   WE ET + +++VMTPQILLD
Sbjct: 103 FNVIKDHTDFEVAEYYGA----------MGVDDWNMNCWEKETSERDVLVMTPQILLD 150


>ref|XP_002458957.1| hypothetical protein SORBIDRAFT_03g043355 [Sorghum bicolor]
           gi|241930932|gb|EES04077.1| hypothetical protein
           SORBIDRAFT_03g043355 [Sorghum bicolor]
          Length = 1651

 Score =  113 bits (283), Expect = 1e-23
 Identities = 61/118 (51%), Positives = 80/118 (67%)
 Frame = +2

Query: 2   LDVFKVAMQRNTIAHLDTGAGKTMIAIMIIKEVALSLSKQPSEKKLMIFLAPTRNLVEQQ 181
           LDV++VAM++NTIA LDTGAGKTMIA+M+IK     +SK  +++KL+IFLAPT  LV QQ
Sbjct: 37  LDVYEVAMRQNTIAMLDTGAGKTMIAVMLIKHFG-KISKANNDRKLIIFLAPTVQLVTQQ 95

Query: 182 FKVLQESTDLVVDFYHGAKVGVGKHINGKKVDDWDGAVWEHETKKNNIMVMTPQILLD 355
            +V++  TD  V+ YHGA          K VD W    W+ +  K  +MVMTPQ+LLD
Sbjct: 96  CEVIKSYTDFEVEHYHGA----------KGVDQWKAHSWQQQFLKYQVMVMTPQVLLD 143


>ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
           gi|223544646|gb|EEF46162.1| Ribonuclease III, putative
           [Ricinus communis]
          Length = 1660

 Score =  112 bits (279), Expect = 4e-23
 Identities = 59/116 (50%), Positives = 84/116 (72%)
 Frame = +2

Query: 8   VFKVAMQRNTIAHLDTGAGKTMIAIMIIKEVALSLSKQPSEKKLMIFLAPTRNLVEQQFK 187
           VF+VAM+RNTIA L+TGAGKTMIA+M+I+E+  ++ K    KKL+IFLAPT +LV QQ++
Sbjct: 69  VFEVAMKRNTIAVLETGAGKTMIAVMLIREIGQAI-KSNDFKKLIIFLAPTVHLVNQQYE 127

Query: 188 VLQESTDLVVDFYHGAKVGVGKHINGKKVDDWDGAVWEHETKKNNIMVMTPQILLD 355
           V++++T+  V  Y+GA          K +D W   VWE E  +++++VMTPQILLD
Sbjct: 128 VIKDNTNFKVGEYYGA----------KGIDGWSMKVWEKEINEHDVLVMTPQILLD 173


>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  110 bits (275), Expect = 1e-22
 Identities = 59/116 (50%), Positives = 80/116 (68%)
 Frame = +2

Query: 8   VFKVAMQRNTIAHLDTGAGKTMIAIMIIKEVALSLSKQPSEKKLMIFLAPTRNLVEQQFK 187
           VF+VA +RNTIA LDTG GKTMIA+M+I+E+  ++ K    K  +IFLAPT +LV QQFK
Sbjct: 53  VFEVAKRRNTIAVLDTGTGKTMIALMLIREIGQAV-KADGRKLFIIFLAPTVHLVNQQFK 111

Query: 188 VLQESTDLVVDFYHGAKVGVGKHINGKKVDDWDGAVWEHETKKNNIMVMTPQILLD 355
           V+++ST   V+ Y+GA          K VD+W    WE E  +++++VMTPQILLD
Sbjct: 112 VIKDSTGFEVEEYYGA----------KGVDEWSAKSWEKEISEHDVLVMTPQILLD 157


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