BLASTX nr result

ID: Atractylodes21_contig00034564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034564
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   130   1e-28
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   128   7e-28
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   119   2e-25
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...   108   7e-22

>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/109 (53%), Positives = 78/109 (71%)
 Frame = -1

Query: 547 ILYKTTEFRVYKLVSSGPKWECMNGLDGWALFVGENASVSFRASDYPGCKENCIYFTDDY 368
           ++Y+TT F+V +L S  P+WE ++ L   ALF+GEN S+S  + D+PGCK NCIY+TDDY
Sbjct: 283 LIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDY 342

Query: 367 SEWNYDGANGNHDLGIYEMENGSIVALRCYPEKIYNGRRWPPPIWITPS 221
           SE NYDG  G  DLGI+ +E+GSI  L C   +I    RWPPP+W+TP+
Sbjct: 343 SEDNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRI----RWPPPLWVTPN 387


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  129 bits (324), Expect = 3e-28
 Identities = 55/108 (50%), Positives = 75/108 (69%)
 Frame = -1

Query: 544 LYKTTEFRVYKLVSSGPKWECMNGLDGWALFVGENASVSFRASDYPGCKENCIYFTDDYS 365
           +YKT  F V+KL  +GP+WE +  L    LF+GEN+S++  AS   GC  +CIY+TDDYS
Sbjct: 284 IYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYS 343

Query: 364 EWNYDGANGNHDLGIYEMENGSIVALRCYPEKIYNGRRWPPPIWITPS 221
             NYDG  G HDLGI+++ +GSI  L CYP   Y+  +WPPP+WI+P+
Sbjct: 344 ANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISPN 391


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  128 bits (321), Expect = 7e-28
 Identities = 57/109 (52%), Positives = 77/109 (70%)
 Frame = -1

Query: 547 ILYKTTEFRVYKLVSSGPKWECMNGLDGWALFVGENASVSFRASDYPGCKENCIYFTDDY 368
           ++Y+TT F+V +L    P+WE ++ L   ALF+GEN S+S  + D+PGCK NCIY+TDDY
Sbjct: 283 LIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDY 342

Query: 367 SEWNYDGANGNHDLGIYEMENGSIVALRCYPEKIYNGRRWPPPIWITPS 221
           SE NYDG  G  DLGI+ +E+GSI  L C   +I    RWPPP+W+TP+
Sbjct: 343 SEDNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRI----RWPPPLWVTPN 387


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score =  119 bits (299), Expect = 2e-25
 Identities = 50/109 (45%), Positives = 77/109 (70%)
 Frame = -1

Query: 547 ILYKTTEFRVYKLVSSGPKWECMNGLDGWALFVGENASVSFRASDYPGCKENCIYFTDDY 368
           ++Y+T  F V++L  +GP+W  M+ L   ALF+GEN+S+S  A+D+ GC  NCIY+TDDY
Sbjct: 288 LIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDY 347

Query: 367 SEWNYDGANGNHDLGIYEMENGSIVALRCYPEKIYNGRRWPPPIWITPS 221
            + NYDG  G+HDLGI+++ + +I  L CYP    +  +W PP+W++P+
Sbjct: 348 LDANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPN 396


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score =  108 bits (269), Expect = 7e-22
 Identities = 50/110 (45%), Positives = 71/110 (64%)
 Frame = -1

Query: 550 DILYKTTEFRVYKLVSSGPKWECMNGLDGWALFVGENASVSFRASDYPGCKENCIYFTDD 371
           D++Y+T  F V+K+      W+ +  L    LFVG N+S+SF ASD+ GC  +CIYFTDD
Sbjct: 282 DLVYRTVGFEVFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDD 341

Query: 370 YSEWNYDGANGNHDLGIYEMENGSIVALRCYPEKIYNGRRWPPPIWITPS 221
           YSE N D A G HDLG++ + + SI  L C+ +   +  RWP PIW++P+
Sbjct: 342 YSESNDDDACGKHDLGVFRLRDKSIEPLPCFNQNSCSRLRWPLPIWVSPN 391


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