BLASTX nr result

ID: Atractylodes21_contig00034498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034498
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [...   203   3e-50
ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002525052.1| conserved hypothetical protein [Ricinus comm...   178   9e-43
ref|NP_567351.1| elongator protein 6 [Arabidopsis thaliana] gi|7...   171   8e-41
dbj|BAK04868.1| predicted protein [Hordeum vulgare subsp. vulgare]    170   2e-40

>ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [Vitis vinifera]
           gi|297736457|emb|CBI25328.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score =  203 bits (516), Expect = 3e-50
 Identities = 106/171 (61%), Positives = 127/171 (74%), Gaps = 8/171 (4%)
 Frame = -1

Query: 644 KRLIFFDMLRLECPDDG---VEGGIIALYGNIQKAVEV--SSLNKNITIMIDDISLLEVA 480
           KR +FF++L LECPD       GG+ +LY  IQK +        K+ITIMIDDISL+EVA
Sbjct: 86  KRFVFFNLLTLECPDGDEGKTSGGLPSLYREIQKVIIALHEENRKSITIMIDDISLMEVA 145

Query: 479 ANGSTKDVLDFMHYCHTLTTQFRCTIITIIHEDIYSSGDQFTLPLQMEYLADIKIKAEPL 300
           ANGST  VLDF+HYCHTLT +F C ++T+ H DIYSS ++  L LQMEYLADI IKAEPL
Sbjct: 146 ANGSTNHVLDFLHYCHTLTLEFGCLLVTVNHGDIYSSMERPALLLQMEYLADILIKAEPL 205

Query: 299 VTGLATDVHGQLTVLNKGTTDGLG---SKLRNFHYRVKENSVDYFYPGGRT 156
            TGLATDVHGQLTVLNKG  +G G   ++  NFH++VKENSV+ FYPG RT
Sbjct: 206 STGLATDVHGQLTVLNKGICEGQGNSRNRTHNFHFKVKENSVECFYPGTRT 256


>ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|222851871|gb|EEE89418.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  186 bits (473), Expect = 2e-45
 Identities = 99/171 (57%), Positives = 125/171 (73%), Gaps = 9/171 (5%)
 Frame = -1

Query: 641 RLIFFDMLRLECPDDGV----EGGIIALYGNIQKAV-EVSSLNKN-ITIMIDDISLLEVA 480
           R  FFDML+L CPD+      +GG  ALY  IQ  +  +   NKN  TIMIDD+SL+EVA
Sbjct: 91  RFFFFDMLKLLCPDEKEGKTGKGGFTALYWKIQNTICALPENNKNHATIMIDDMSLMEVA 150

Query: 479 ANGSTKDVLDFMHYCHTLTTQFRCTIITIIHEDIYSSGDQFTLPLQMEYLADIKIKAEPL 300
           A+GS+  VL+FMHYCHTLT++  C++IT+ HEDIY+S ++ T  LQ +YL D+ IKAEPL
Sbjct: 151 AHGSSDHVLNFMHYCHTLTSELGCSLITLNHEDIYTSMERPTFMLQTKYLVDVLIKAEPL 210

Query: 299 VTGLATDVHGQLTVLNKGTTDGLGS---KLRNFHYRVKENSVDYFYPGGRT 156
            TGLA DVHGQLTVLN+   +  GS   K+ NFH++VKENSV+YFYPG RT
Sbjct: 211 ATGLAADVHGQLTVLNRDFCNVKGSSKNKISNFHFKVKENSVEYFYPGTRT 261


>ref|XP_002525052.1| conserved hypothetical protein [Ricinus communis]
           gi|223535633|gb|EEF37299.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 284

 Score =  178 bits (451), Expect = 9e-43
 Identities = 100/190 (52%), Positives = 122/190 (64%), Gaps = 28/190 (14%)
 Frame = -1

Query: 641 RLIFFDMLRLECPD------------------DGVEG-----GIIALYGNIQKAVEVSSL 531
           R  FFDML L+C                    D  EG     G I L+G IQK +     
Sbjct: 91  RFFFFDMLMLQCSGEKWLNLFDHKSFEFNSLLDRNEGNSNKAGFITLFGEIQKVICALPE 150

Query: 530 N--KNITIMIDDISLLEVAANGSTKDVLDFMHYCHTLTTQFRCTIITIIHEDIYSSGDQF 357
           N   ++TIMIDD+SL+EVAA GS+  VLDF+HYCHTLT+ F C+++T+ HEDIYS+ ++ 
Sbjct: 151 NYKNHVTIMIDDVSLMEVAAYGSSDRVLDFLHYCHTLTSDFGCSLVTLNHEDIYSTMERR 210

Query: 356 TLPLQMEYLADIKIKAEPLVTGLATDVHGQLTVLNKG---TTDGLGSKLRNFHYRVKENS 186
              LQMEYLADI IKAEPL TGLATDVHGQLTVL+ G       L +K+ NF + VKENS
Sbjct: 211 AFILQMEYLADILIKAEPLATGLATDVHGQLTVLSTGICCRKGNLKNKISNFQFMVKENS 270

Query: 185 VDYFYPGGRT 156
           V+YFYPG RT
Sbjct: 271 VEYFYPGSRT 280


>ref|NP_567351.1| elongator protein 6 [Arabidopsis thaliana]
           gi|75154680|sp|Q8L9Y2.1|ELP6_ARATH RecName:
           Full=Elongator complex protein 6; Short=AtELP6; AltName:
           Full=Elongator component 6; AltName: Full=UPF0405
           protein ELP6 gi|21593728|gb|AAM65695.1| unknown
           [Arabidopsis thaliana] gi|87116610|gb|ABD19669.1|
           At4g10090 [Arabidopsis thaliana]
           gi|110735719|dbj|BAE99839.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657437|gb|AEE82837.1|
           elongator protein 6 [Arabidopsis thaliana]
          Length = 262

 Score =  171 bits (434), Expect = 8e-41
 Identities = 93/173 (53%), Positives = 124/173 (71%), Gaps = 11/173 (6%)
 Frame = -1

Query: 641 RLIFFDMLRLECPD-DGVEGGIIA---LYGNIQKAVEV--SSLNKNITIMIDDISLLEVA 480
           RL+FFDML ++C D D +E  + A   L+  IQ+ V    S  + NIT+M+DD+SLLE+A
Sbjct: 90  RLVFFDMLMVKCSDGDQMEDNVSAVAKLFREIQETVRKLQSVTSGNITVMVDDMSLLEIA 149

Query: 479 ANGSTKD-VLDFMHYCHTLTTQFRCTIITIIHEDIYSSGDQFTLPLQMEYLADIKIKAEP 303
             GS  D VLDF+HYCHTL+++  C+++ + HEDIY+S ++    LQM  LAD+ IKAEP
Sbjct: 150 TTGSNSDHVLDFLHYCHTLSSESNCSLVILNHEDIYASMERPAFLLQMVCLADVVIKAEP 209

Query: 302 LVTGLATDVHGQLTVLNKG-TTDGLGS---KLRNFHYRVKENSVDYFYPGGRT 156
           L +GLA DVHGQLTVLNKG +  G GS   KL+NF +R+KEN +DYFYPG R+
Sbjct: 210 LASGLANDVHGQLTVLNKGISNSGRGSSRNKLQNFQFRIKENGIDYFYPGCRS 262


>dbj|BAK04868.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 250

 Score =  170 bits (431), Expect = 2e-40
 Identities = 91/174 (52%), Positives = 115/174 (66%), Gaps = 12/174 (6%)
 Frame = -1

Query: 644 KRLIFFDMLRLECPDDGVEGGIIA-----LYGNIQKAVEVSSLNKN---ITIMIDDISLL 489
           +RL FFD   L+    G  GG+IA     LY  +Q+ VE     +N    T+MIDD+SLL
Sbjct: 79  ERLHFFD---LQAFPGGTRGGVIADSLAQLYSGLQRVVEAYRTGENAGRFTVMIDDVSLL 135

Query: 488 EVAANGSTKDVLDFMHYCHTLTTQFRCTIITIIHEDIYSSGDQFTLPLQMEYLADIKIKA 309
           EVAANGS  DVLDF+HYC TLT++  C+++ + HEDIYSS D   L L + Y+AD+ IKA
Sbjct: 136 EVAANGSADDVLDFLHYCVTLTSEMNCSLVVLNHEDIYSSEDGVGLLLHLRYIADLVIKA 195

Query: 308 EPLVTGLATDVHGQLTVLNKG----TTDGLGSKLRNFHYRVKENSVDYFYPGGR 159
            PL TGLA DVHGQL+V+NKG         G K+ NFH++VKEN  D+FYPG R
Sbjct: 196 APLSTGLAADVHGQLSVVNKGMLIEQRPAKGQKVWNFHFKVKENGADFFYPGSR 249


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