BLASTX nr result

ID: Atractylodes21_contig00034485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034485
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]   111   7e-23
ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containi...   110   9e-23
ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containi...    99   5e-19
ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containi...    98   6e-19

>emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  111 bits (277), Expect = 7e-23
 Identities = 61/138 (44%), Positives = 83/138 (60%)
 Frame = -3

Query: 433 MNGTSNALLNISHLFTRTIVPTAAQVESLLYNYAGNKSLTNITKLHARLIISGLLAPWES 254
           M+G S AL    HL T T     A+ +SLL      KS+ N  ++HA  I  GLL+   S
Sbjct: 1   MDGPSQALSKSKHLLTAT-----ARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYS 55

Query: 253 RYIPALLASGYALSGHVPYARQLFDGLHQRTKRAYNCMIKLYTEKGLMNDALEIFVEMFK 74
            ++ + LA+ YA+ G  P+AR+LFD L   +  ++N MI++YT  GL  DAL +FV+M  
Sbjct: 56  HHLLSSLAAAYAMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLA 115

Query: 73  SGRTKPDALTYPFVVKAC 20
           SGR  PD  TYPFV+KAC
Sbjct: 116 SGRRWPDNYTYPFVIKAC 133


>ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera] gi|296082987|emb|CBI22288.3| unnamed
           protein product [Vitis vinifera]
          Length = 676

 Score =  110 bits (276), Expect = 9e-23
 Identities = 61/138 (44%), Positives = 83/138 (60%)
 Frame = -3

Query: 433 MNGTSNALLNISHLFTRTIVPTAAQVESLLYNYAGNKSLTNITKLHARLIISGLLAPWES 254
           M+G S AL    HL T T     A+ +SLL      KS+ N  ++HA  I  GLL+   S
Sbjct: 1   MDGPSQALSKSKHLLTAT-----ARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYS 55

Query: 253 RYIPALLASGYALSGHVPYARQLFDGLHQRTKRAYNCMIKLYTEKGLMNDALEIFVEMFK 74
            ++ + LA+ YA+ G  P+AR+LFD L   +  ++N MI++YT  GL  DAL +FV+M  
Sbjct: 56  HHLLSSLAAAYAMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLA 115

Query: 73  SGRTKPDALTYPFVVKAC 20
           SGR  PD  TYPFV+KAC
Sbjct: 116 SGRRWPDNYTYPFVIKAC 133


>ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|222848337|gb|EEE85884.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  100 bits (248), Expect = 2e-19
 Identities = 62/141 (43%), Positives = 82/141 (58%)
 Frame = -3

Query: 433 MNGTSNALLNISHLFTRTIVPTAAQVESLLYNYAGNKSLTNITKLHARLIISGLLAPWES 254
           MNG +     IS      + P   Q +SLL +Y   +SLT+  +LHA LI SGLL    S
Sbjct: 1   MNGPTKT--TISKTTKLLLAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLL----S 54

Query: 253 RYIPALLASGYALSGHVPYARQLFDGLHQRTKRAYNCMIKLYTEKGLMNDALEIFVEMFK 74
             I ++L + YA  G+V  AR+LFD L QR    YN MIK+Y  KG   +A+++F+EM  
Sbjct: 55  IDIRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLG 114

Query: 73  SGRTKPDALTYPFVVKACATL 11
           S    PD  TYPFV+KAC+ L
Sbjct: 115 SKDCCPDNYTYPFVIKACSEL 135


>ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 787

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 54/142 (38%), Positives = 80/142 (56%)
 Frame = -3

Query: 430 NGTSNALLNISHLFTRTIVPTAAQVESLLYNYAGNKSLTNITKLHARLIISGLLAPWESR 251
           N  SN+    +   +++++    + +SLL +YA  +SL     LH   I SGLL      
Sbjct: 58  NNLSNSNTTKALSKSKSLIANVHRCDSLLCHYAATRSLNKTKILHGHTITSGLLHSPNFI 117

Query: 250 YIPALLASGYALSGHVPYARQLFDGLHQRTKRAYNCMIKLYTEKGLMNDALEIFVEMFKS 71
           ++P+ LA  YA  G VP AR+LFD L   +   +N +IK+Y +KG   DAL +F  M  S
Sbjct: 118 HLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICS 177

Query: 70  GRTKPDALTYPFVVKACATLSM 5
           G+  PD  T+P V+KAC+ +SM
Sbjct: 178 GKCWPDKYTFPLVIKACSVMSM 199


>ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 709

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 54/142 (38%), Positives = 80/142 (56%)
 Frame = -3

Query: 430 NGTSNALLNISHLFTRTIVPTAAQVESLLYNYAGNKSLTNITKLHARLIISGLLAPWESR 251
           N  SN+    +   +++++    + +SLL +YA  +SL     LH   I SGLL      
Sbjct: 58  NNLSNSNTTKALSKSKSLIANVHRCDSLLRHYAATRSLNKTKILHGHTITSGLLHSPNFI 117

Query: 250 YIPALLASGYALSGHVPYARQLFDGLHQRTKRAYNCMIKLYTEKGLMNDALEIFVEMFKS 71
           ++P+ LA  YA  G VP AR+LFD L   +   +N +IK+Y +KG   DAL +F  M  S
Sbjct: 118 HLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICS 177

Query: 70  GRTKPDALTYPFVVKACATLSM 5
           G+  PD  T+P V+KAC+ +SM
Sbjct: 178 GKFWPDKYTFPLVIKACSVMSM 199


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