BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034436
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303939.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|NP_171835.1| exosome complex component RRP4 [Arabidopsis tha...    59   5e-07
ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-li...    58   7e-07
gb|ACU18895.1| unknown [Glycine max]                                   58   7e-07
ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-li...    57   1e-06

>ref|XP_002303939.1| predicted protein [Populus trichocarpa] gi|222841371|gb|EEE78918.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = -2

Query: 214 LDVILDVVDLSSSKGLDIHEMLGAEFYVLVAEREAERRNSSTRRK 80
           L+VIL+ +DLSS+  L I EMLG EF+VLVAEREAERR S T+RK
Sbjct: 275 LEVILETIDLSSTLNLGIDEMLGPEFHVLVAEREAERRTSMTKRK 319


>ref|NP_171835.1| exosome complex component RRP4 [Arabidopsis thaliana]
           gi|3850568|gb|AAC72108.1| Similar to hypothetical
           protein SPAC2F7.14c gi|1052797 from Schizosaccharomyces
           pombe cosmid gb|Z50142 [Arabidopsis thaliana]
           gi|34365689|gb|AAQ65156.1| At1g03360 [Arabidopsis
           thaliana] gi|51970606|dbj|BAD43995.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332189442|gb|AEE27563.1| exosome complex component
           RRP4 [Arabidopsis thaliana]
          Length = 322

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/46 (60%), Positives = 40/46 (86%)
 Frame = -2

Query: 214 LDVILDVVDLSSSKGLDIHEMLGAEFYVLVAEREAERRNSSTRRKR 77
           L+VI++ V+LS+SK +DIH+MLG+EF+V+VAE EAERR   T+RK+
Sbjct: 279 LEVIMETVNLSNSKNIDIHDMLGSEFHVVVAENEAERRR--TKRKK 322


>ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-like [Glycine max]
          Length = 327

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/45 (60%), Positives = 37/45 (82%)
 Frame = -2

Query: 214 LDVILDVVDLSSSKGLDIHEMLGAEFYVLVAEREAERRNSSTRRK 80
           L++I  ++DLS S  LDIH+MLG+EF VLVAE+EAERR+S  +R+
Sbjct: 283 LEIIKGIIDLSLSMNLDIHDMLGSEFCVLVAEKEAERRSSMKKRR 327


>gb|ACU18895.1| unknown [Glycine max]
          Length = 199

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/45 (60%), Positives = 37/45 (82%)
 Frame = -2

Query: 214 LDVILDVVDLSSSKGLDIHEMLGAEFYVLVAEREAERRNSSTRRK 80
           L++I  ++DLS S  LDIH+MLG+EF VLVAE+EAERR+S  +R+
Sbjct: 155 LEIIKGIIDLSLSMNLDIHDMLGSEFCVLVAEKEAERRSSMKKRR 199


>ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-like [Vitis vinifera]
          Length = 330

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/45 (62%), Positives = 37/45 (82%)
 Frame = -2

Query: 214 LDVILDVVDLSSSKGLDIHEMLGAEFYVLVAEREAERRNSSTRRK 80
           ++VI + V+LSSS  LDIHEMLG+EFYVLVAE EA R++  T++K
Sbjct: 285 VEVIKETVNLSSSLNLDIHEMLGSEFYVLVAEGEATRKSMFTKKK 329