BLASTX nr result

ID: Atractylodes21_contig00034432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00034432
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arab...    80   1e-13
ref|NP_196419.1| RPA70-kDa subunit B [Arabidopsis thaliana] gi|6...    80   2e-13
ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arab...    79   3e-13
ref|NP_200908.1| Replication factor-A protein 1-like protein [Ar...    78   7e-13
dbj|BAD94042.1| RNA helicase [Arabidopsis thaliana]                    78   7e-13

>ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arabidopsis lyrata subsp.
           lyrata] gi|297317139|gb|EFH47561.1| hypothetical protein
           ARALYDRAFT_325405 [Arabidopsis lyrata subsp. lyrata]
          Length = 604

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 31/55 (56%), Positives = 43/55 (78%)
 Frame = -3

Query: 170 PVLFTVRACMTYINPQQTMTYLACKTCKRKVTKGDESGYWCSRCQKKSEDCNIRY 6
           PV F++RA +++I P QTM Y ACKTC +KVT+  +SGYWC  CQKK ++C++RY
Sbjct: 445 PVFFSIRAYISFIKPDQTMWYRACKTCNKKVTEAMDSGYWCEGCQKKDQECSLRY 499


>ref|NP_196419.1| RPA70-kDa subunit B [Arabidopsis thaliana]
           gi|6562316|emb|CAB62614.1| replication factor A-like
           protein [Arabidopsis thaliana]
           gi|332003852|gb|AED91235.1| RPA70-kDa subunit B
           [Arabidopsis thaliana]
          Length = 604

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 31/55 (56%), Positives = 42/55 (76%)
 Frame = -3

Query: 170 PVLFTVRACMTYINPQQTMTYLACKTCKRKVTKGDESGYWCSRCQKKSEDCNIRY 6
           PV F+ RA +++I P QTM Y ACKTC +KVT+  +SGYWC  CQKK ++C++RY
Sbjct: 445 PVFFSTRAYISFIKPDQTMWYRACKTCNKKVTEAMDSGYWCESCQKKDQECSLRY 499


>ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
           lyrata] gi|297312244|gb|EFH42668.1| hypothetical protein
           ARALYDRAFT_496254 [Arabidopsis lyrata subsp. lyrata]
          Length = 631

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 32/55 (58%), Positives = 42/55 (76%)
 Frame = -3

Query: 170 PVLFTVRACMTYINPQQTMTYLACKTCKRKVTKGDESGYWCSRCQKKSEDCNIRY 6
           PV F+ RA +++I P QTM Y ACKTC +KVT+  +SGYWC  CQKK E+C++RY
Sbjct: 471 PVFFSTRAYISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQKKYEECSLRY 525


>ref|NP_200908.1| Replication factor-A protein 1-like protein [Arabidopsis thaliana]
           gi|10177323|dbj|BAB10649.1| replication protein A1
           [Arabidopsis thaliana] gi|28393124|gb|AAO41995.1|
           putative RNA helicase [Arabidopsis thaliana]
           gi|332010026|gb|AED97409.1| Replication factor-A protein
           1-like protein [Arabidopsis thaliana]
          Length = 629

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 31/55 (56%), Positives = 42/55 (76%)
 Frame = -3

Query: 170 PVLFTVRACMTYINPQQTMTYLACKTCKRKVTKGDESGYWCSRCQKKSEDCNIRY 6
           PV F+ RA +++I P QTM Y ACKTC +KVT+  +SGYWC  CQ+K E+C++RY
Sbjct: 469 PVFFSTRAYISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLRY 523


>dbj|BAD94042.1| RNA helicase [Arabidopsis thaliana]
          Length = 253

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 31/55 (56%), Positives = 42/55 (76%)
 Frame = -3

Query: 170 PVLFTVRACMTYINPQQTMTYLACKTCKRKVTKGDESGYWCSRCQKKSEDCNIRY 6
           PV F+ RA +++I P QTM Y ACKTC +KVT+  +SGYWC  CQ+K E+C++RY
Sbjct: 93  PVFFSTRAYISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLRY 147


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